4ZLK
Crystal structure of mouse myosin-5a in complex with calcium-bound calmodulin
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4zlka1 | All beta proteins | SH3-like barrel | Myosin S1 fragment, N-terminal domain | automated matches | automated matches | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
A | d4zlka2 | Alpha and beta proteins (a/b) | P-loop containing nucleoside triphosphate hydrolases | P-loop containing nucleoside triphosphate hydrolases | Motor proteins | automated matches | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
B | d4zlkb_ | All alpha proteins | EF Hand-like | EF-hand | Calmodulin-like | Calmodulin | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e4zlkA3 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF00612 | e4zlkA1 | A: alpha bundles | X: Myosin VI lever arm (From Topology) | H: Myosin VI lever arm (From Topology) | T: Myosin VI lever arm | F: PF00612 | ECOD (1.6) |
A | PF00063 | e4zlkA2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00063 | ECOD (1.6) |
B | PF00036 | e4zlkB2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: PF00036 | ECOD (1.6) |
B | PF13499 | e4zlkB1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: PF13499 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00612 | IQ calmodulin-binding motif (IQ) | IQ calmodulin-binding motif | - | Motif | |
PF00063 | Myosin head (motor domain) (Myosin_head) | Myosin head (motor domain) | - | Domain | |
PF13499 | EF-hand domain pair (EF-hand_7) | EF-hand domain pair | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002710 | Dilute domain | Domain | |
IPR000048 | IQ motif, EF-hand binding site | Binding Site | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR004009 | Myosin, N-terminal, SH3-like | Domain | |
IPR036961 | Kinesin motor domain superfamily | Homologous Superfamily | |
IPR036103 | Class V myosin, motor domain | Domain | |
IPR037988 | Myosin 5a, cargo-binding domain | Domain | |
IPR001609 | Myosin head, motor domain | Domain | |
IPR002048 | EF-hand domain | Domain | |
IPR018247 | EF-Hand 1, calcium-binding site | Binding Site | |
IPR011992 | EF-hand domain pair | Homologous Superfamily |