6PO3
ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 3
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
I [auth J] | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
K [auth L] | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
M [auth N] | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
G [auth H] | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
H [auth I] | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
J [auth K] | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
L [auth M] | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF10431 | e6po3B2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF10431 | ECOD (1.6) |
B | PF07724 | e6po3B1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF07724 | ECOD (1.6) |
C | PF10431 | e6po3C2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF10431 | ECOD (1.6) |
C | PF07724 | e6po3C1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF07724 | ECOD (1.6) |
E | PF10431 | e6po3E1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF10431 | ECOD (1.6) |
E | PF07724 | e6po3E2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF07724 | ECOD (1.6) |
A | PF10431 | e6po3A2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF10431 | ECOD (1.6) |
A | PF07724 | e6po3A1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF07724 | ECOD (1.6) |
D | PF10431 | e6po3D2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF10431 | ECOD (1.6) |
D | PF07724 | e6po3D1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF07724 | ECOD (1.6) |
F | PF10431 | e6po3F1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF10431 | ECOD (1.6) |
F | PF07724 | e6po3F2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF07724 | ECOD (1.6) |
I [auth J] | PF00574 | e6po3J1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: PF00574 | ECOD (1.6) |
K [auth L] | PF00574 | e6po3L1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: PF00574 | ECOD (1.6) |
M [auth N] | PF00574 | e6po3N1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: PF00574 | ECOD (1.6) |
G [auth H] | PF00574 | e6po3H1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: PF00574 | ECOD (1.6) |
H [auth I] | PF00574 | e6po3I1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: PF00574 | ECOD (1.6) |
J [auth K] | PF00574 | e6po3K1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: PF00574 | ECOD (1.6) |
L [auth M] | PF00574 | e6po3M1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: PF00574 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF10431 | C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) | C-terminal, D2-small domain, of ClpB protein | This is the C-terminal domain of ClpB protein, referred to as the D2-small domain, and is a mixed alpha-beta structure. Compared with the D1-small domain (included in AAA, Pfam:PF00004) it lacks the long coiled-coil insertion, and instead of helix C4 ... | Domain | |
PF07724 | AAA domain (Cdc48 subfamily) (AAA_2) | AAA domain (Cdc48 subfamily) | This Pfam entry includes some of the AAA proteins not detected by the Pfam:PF00004 model. | Domain | |
PF00574 | Clp protease (CLP_protease) | Clp protease | The Clp protease has an active site catalytic triad. In E. coli Clp protease, ser-111, his-136 and asp-185 form the catalytic triad. Swiss:P48254 has lost all of these active site residues and is therefore inactive. Swiss:P42379 contains two large in ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR046425 | Clp protease, ATP-binding subunit ClpX, bacteria | Family | |
IPR004487 | Clp protease, ATP-binding subunit ClpX | Family | |
IPR010603 | Zinc finger, ClpX C4-type | Domain | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR003959 | ATPase, AAA-type, core | Domain | |
IPR019489 | Clp ATPase, C-terminal | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR038366 | Zinc finger, ClpX C4-type superfamily | Homologous Superfamily | |
IPR029045 | ClpP/crotonase-like domain superfamily | Homologous Superfamily | |
IPR001907 | ATP-dependent Clp protease proteolytic subunit | Family | |
IPR018215 | ClpP, Ser active site | Active Site | |
IPR023562 | Clp protease proteolytic subunit /Translocation-enhancing protein TepA | Family | |
IPR033135 | ClpP, histidine active site | Active Site |