6PZW
CryoEM derived model of NA-22 Fab in complex with N9 Shanghai2
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Sialidases | 8093684 | 3001607 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Sialidases | 8093684 | 3001607 | SCOP2B (2022-06-29) |
I [auth C] | SCOP2B Superfamily | Sialidases | 8093684 | 3001607 | SCOP2B (2022-06-29) |
J [auth B] | SCOP2B Superfamily | Sialidases | 8093684 | 3001607 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Neur | e6pzwA1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 6-bladed | F: Neur | ECOD (1.6) |
D | Neur | e6pzwD1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 6-bladed | F: Neur | ECOD (1.6) |
I [auth C] | Neur | e6pzwC1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 6-bladed | F: Neur | ECOD (1.6) |
J [auth B] | Neur | e6pzwB1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 6-bladed | F: Neur | ECOD (1.6) |
C [auth K] | V-set_12 | e6pzwK1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_12 | ECOD (1.6) |
F | V-set_12 | e6pzwF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_12 | ECOD (1.6) |
H [auth J] | V-set_12 | e6pzwJ1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_12 | ECOD (1.6) |
L [auth H] | V-set_12 | e6pzwH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_12 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.120.10.10 | Mainly Beta | 6 Propeller | Neuraminidase | CATH (utative) | |
D | 2.120.10.10 | Mainly Beta | 6 Propeller | Neuraminidase | CATH (utative) | |
I [auth C] | 2.120.10.10 | Mainly Beta | 6 Propeller | Neuraminidase | CATH (utative) | |
J [auth B] | 2.120.10.10 | Mainly Beta | 6 Propeller | Neuraminidase | CATH (utative) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
B [auth I], E, G, K [auth L] | Fab NA-22, anti-N9 | L-LAMBDA | Homo sapiens (human) | IGLV2-14*01, IGLJ1*01, IGLC2*01, IGLC2*02, IGLC3*04 | V-DOMAIN V-LAMBDA, C-DOMAIN C-LAMBDA | IG | FAB-GAMMA-1_LAMBDA | IMGT (202442-0) |
C [auth K], F, H [auth J], L [auth H] | Fab NA-22, anti-N9 | VH-CH1 | Homo sapiens (human) | IGHV3-30*18, IGHV3-30-5*01, IGHJ4*01, IGHJ4*02, IGHJ4*03, IGHG1*03, IGHG1*08, IGHG1*06 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-1_LAMBDA | IMGT (202442-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
B [auth I], E, G, K [auth L] | Light Chain | IGLV2 | Lambda | neuraminidase | SAbDab (2024-10-25) |
C [auth K], F, H [auth J], L [auth H] | Heavy Chain | IGHV3 | - | neuraminidase | SAbDab (2024-10-25) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, D, I [auth C], J [auth B] | PF00064 | Neuraminidase (Neur) | Neuraminidase | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, D, I [auth C], J [auth B] | Neuraminidase |
| ||
B [auth I], E, G, K [auth L] | NA-22 fragment antigen binding light chain | - | - | - |
C [auth K], F, H [auth J], L [auth H] | NA-22 fragment antigen binding heavy chain | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, D, I [auth C], J [auth B] | IPR001860 | Glycoside hydrolase, family 34 | Family |
A, D, I [auth C], J [auth B] | IPR033654 | Sialidase, Influenza viruses A/B | Domain |
A, D, I [auth C], J [auth B] | IPR036278 | Sialidase superfamily | Homologous Superfamily |