Download MendeleyCrystal structure of streptavidin with one wild type subunit and three mutated subunits (N23A/S27D/S45A)
Zhang, M., Biswas, S., Deng, W., Yu, H.To be published.
5TO2
Crystal structure of streptavidin with one wild type subunit and three mutated subunits (N23A/S27D/S45A)
- PDB DOI: https://doi.org/10.2210/pdb5TO2/pdb
- Classification: BIOTIN-BINDING PROTEIN
- Organism(s): Streptomyces avidinii
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2016-10-16 Released: 2017-05-10
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.65 Å
- R-Value Free: 0.234
- R-Value Work: 0.204
- R-Value Observed: 0.206
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Streptavidin | 125 | Streptomyces avidinii | Mutation(s): 3 |  | |
UniProt | |||||
Find proteins for P22629 (Streptomyces avidinii) Explore P22629 Go to UniProtKB: P22629 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P22629 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Streptavidin | 124 | Streptomyces avidinii | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for P22629 (Streptomyces avidinii) Explore P22629 Go to UniProtKB: P22629 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P22629 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PEG Query on PEG | E [auth D] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.65 Å
- R-Value Free: 0.234
- R-Value Work: 0.204
- R-Value Observed: 0.206
- Space Group: P 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 44.357 | α = 87.54 |
| b = 56.738 | β = 85.89 |
| c = 57.435 | γ = 67.99 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| MOSFLM | data reduction |
| SCALA | data scaling |
| MOLREP | phasing |
Entry History
Deposition Data
- Released Date: 2017-05-10 Deposition Author(s): Zhang, M., Biswas, S., Deng, W., Yu, H.
Revision History (Full details and data files)
- Version 1.0: 2017-05-10
Type: Initial release - Version 1.1: 2024-03-06
Changes: Data collection, Database references
