6N84
MBP-fusion protein of transducin-alpha residues 327-350
- PDB DOI: https://doi.org/10.2210/pdb6N84/pdb
- Classification: CHAPERONE
- Organism(s): Escherichia coli O157:H7, Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): Yes 
- Deposited: 2018-11-28 Released: 2019-07-10 
- Funding Organization(s): National Institutes of Health/National Eye Institute (NIH/NEI)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.75 Å
- R-Value Free: 0.185 
- R-Value Work: 0.157 
- R-Value Observed: 0.158 
wwPDB Validation   3D Report Full Report
This is version 3.0 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Maltose/maltodextrin-binding periplasmic protein,Guanine nucleotide-binding protein G(t) subunit alpha-2 | 415 | Escherichia coli O157:H7, Homo sapiens This entity is chimeric | Mutation(s): 7  Gene Names: malE, Z5632, ECs5017, GNAT2, GNATC | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P0AEX9 (Escherichia coli (strain K12)) Explore P0AEX9  Go to UniProtKB:  P0AEX9 | |||||
Find proteins for P19087 (Homo sapiens) Explore P19087  Go to UniProtKB:  P19087 | |||||
PHAROS:  P19087 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Groups | P0AEX9P19087 | ||||
Sequence AnnotationsExpand | |||||
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Oligosaccharides
Small Molecules
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | C [auth A] D [auth A] E [auth A] F [auth A] G [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Biologically Interesting Molecules (External Reference) 1 Unique
Entity ID: 2 | |||||
---|---|---|---|---|---|
ID | Chains | Name | Type/Class | 2D Diagram | 3D Interactions |
PRD_900001 Query on PRD_900001 | B | alpha-maltose | Oligosaccharide / Nutrient |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.75 Å
- R-Value Free: 0.185 
- R-Value Work: 0.157 
- R-Value Observed: 0.158 
- Space Group: P 63
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 83.07 | α = 90 |
b = 83.07 | β = 90 |
c = 109.229 | γ = 120 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
XDS | data reduction |
SCALA | data scaling |
PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2019-07-10  Deposition Author(s): Srivastava, D., Gakhar, L., Artemyev, N.O.
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Eye Institute (NIH/NEI) | United States | NIH R01 EY12682 |
Revision History (Full details and data files)
- Version 1.0: 2019-07-10
Type: Initial release - Version 1.1: 2019-07-24
Changes: Data collection, Database references - Version 1.2: 2019-12-11
Changes: Author supporting evidence - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Atomic model, Data collection, Derived calculations, Non-polymer description, Structure summary - Version 2.1: 2023-10-11
Changes: Data collection, Database references, Refinement description, Structure summary - Version 3.0: 2024-01-10
Changes: Advisory, Atomic model, Database references, Derived calculations, Polymer sequence, Source and taxonomy, Structure summary