6USX

Identification of the Clinical Development Candidate MRTX849, a Covalent KRASG12C Inhibitor for the Treatment of Cancer


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.27 Å
  • R-Value Free: 0.250 
  • R-Value Work: 0.187 

wwPDB Validation   3D Report Full Report

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This is version 1.2 of the entry. See complete history


Literature

Identification of the Clinical Development CandidateMRTX849, a Covalent KRASG12CInhibitor for the Treatment of Cancer.

Fell, J.B.Fischer, J.P.Baer, B.R.Blake, J.F.Bouhana, K.Briere, D.M.Brown, K.D.Burgess, L.E.Burns, A.C.Burkard, M.R.Chiang, H.Chicarelli, M.J.Cook, A.W.Gaudino, J.J.Hallin, J.Hanson, L.Hartley, D.P.Hicken, E.J.Hingorani, G.P.Hinklin, R.J.Mejia, M.J.Olson, P.Otten, J.N.Rhodes, S.P.Rodriguez, M.E.Savechenkov, P.Smith, D.J.Sudhakar, N.Sullivan, F.X.Tang, T.P.Vigers, G.P.Wollenberg, L.Christensen, J.G.Marx, M.A.

(2020) J Med Chem 63: 6679-6693

  • DOI: https://doi.org/10.1021/acs.jmedchem.9b02052
  • Primary Citation of Related Structures:  
    6USX, 6USZ, 6UT0

  • PubMed Abstract: 

    Capping off an era marred by drug development failures and punctuated by waning interest and presumed intractability toward direct targeting of KRAS, new technologies and strategies are aiding in the target's resurgence. As previously reported, the tetrahydropyridopyrimidines were identified as irreversible covalent inhibitors of KRAS G12C that bind in the switch-II pocket of KRAS and make a covalent bond to cysteine 12. Using structure-based drug design in conjunction with a focused in vitro absorption, distribution, metabolism and excretion screening approach, analogues were synthesized to increase the potency and reduce metabolic liabilities of this series. The discovery of the clinical development candidate MRTX849 as a potent, selective covalent inhibitor of KRAS G12C is described.


  • Organizational Affiliation

    Array BioPharma Inc, 3200 Walnut Street, Boulder, Colorado 80301, United States.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
GTPase KRas
A, B
170Homo sapiensMutation(s): 4 
Gene Names: KRASKRAS2RASK2
UniProt & NIH Common Fund Data Resources
Find proteins for P01116 (Homo sapiens)
Explore P01116 
Go to UniProtKB:  P01116
PHAROS:  P01116
GTEx:  ENSG00000133703 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP01116
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.27 Å
  • R-Value Free: 0.250 
  • R-Value Work: 0.187 
  • Space Group: C 2 2 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 88.57α = 90
b = 156.49β = 90
c = 62.98γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
iMOSFLMdata reduction
SCALAdata scaling
PHASERphasing

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2020-04-22
    Type: Initial release
  • Version 1.1: 2020-07-22
    Changes: Database references
  • Version 1.2: 2023-10-11
    Changes: Data collection, Database references, Derived calculations, Refinement description