Download MendeleyCrystal Structure of an Arabidopsis Copine providing insights into this protein family
Wang, Q.C., Jiang, M.Q., Isupov, M.N., Sun, L.F., Wu, Y.K.To be published.
6KXT
BON1-C2B
- PDB DOI: https://doi.org/10.2210/pdb6KXT/pdb
- Classification: LIPID BINDING PROTEIN
- Organism(s): Arabidopsis thaliana
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2019-09-12 Released: 2020-09-16
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.25 Å
- R-Value Free: 0.195
- R-Value Work: 0.168
- R-Value Observed: 0.170
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Protein BONZAI 1 | 144 | Arabidopsis thaliana | Mutation(s): 0 Gene Names: BON1, CPN1, At5g61900, K22G18.2 |  | |
UniProt | |||||
Find proteins for Q941L3 (Arabidopsis thaliana) Explore Q941L3 Go to UniProtKB: Q941L3 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q941L3 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MES Query on MES | B [auth A] | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID C6 H13 N O4 S SXGZJKUKBWWHRA-UHFFFAOYSA-N |  | ||
| SO4 Query on SO4 | C [auth A], D [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.25 Å
- R-Value Free: 0.195
- R-Value Work: 0.168
- R-Value Observed: 0.170
- Space Group: I 2 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 47.844 | α = 90 |
| b = 69.594 | β = 90 |
| c = 77.396 | γ = 90 |
| Software Name | Purpose |
|---|---|
| Aimless | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| PHENIX | phasing |
Entry History
Deposition Data
- Released Date: 2020-09-16 Deposition Author(s): Wang, Q.C., Jiang, M.Q., Isupov, M.N., Sun, L.F., Wu, Y.K.
Revision History (Full details and data files)
- Version 1.0: 2020-09-16
Type: Initial release - Version 1.1: 2024-03-27
Changes: Data collection, Database references
