6ZNM

The pointed end complex of dynactin bound to BICDR1


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report



Literature

Cryo-EM reveals the complex architecture of the shoulder and pointed end of dynactin

Lau, C.K.O'Reilly, F.J.Santhanam, B.Lacey, S.E.Rappsilber, J.Carter, A.P.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Actin, cytoplasmic 1H375Sus scrofaMutation(s): 0 
Gene Names: ACTB
Find proteins for Q6QAQ1 (Sus scrofa)
Explore Q6QAQ1 
Go to UniProtKB:  Q6QAQ1
Protein Feature View
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence

Find similar proteins by: Sequence  |  Structure

Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
Arp11J417Sus scrofaMutation(s): 0 
Gene Names: ACTR10
Find proteins for I3LHK5 (Sus scrofa)
Explore I3LHK5 
Go to UniProtKB:  I3LHK5
Protein Feature View
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence

Find similar proteins by: Sequence  |  Structure

Entity ID: 5
MoleculeChainsSequence LengthOrganismDetails
Dynactin 6U190Sus scrofaMutation(s): 0 
Gene Names: DCTN6
Find proteins for D0G6S1 (Sus scrofa)
Explore D0G6S1 
Go to UniProtKB:  D0G6S1
Protein Feature View
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence

Find similar proteins by: Sequence  |  Structure

Entity ID: 6
MoleculeChainsSequence LengthOrganismDetails
Dynactin subunit 5V182Sus scrofaMutation(s): 0 
Gene Names: DCTN5
Find proteins for A0A286ZK88 (Sus scrofa)
Explore A0A286ZK88 
Go to UniProtKB:  A0A286ZK88
Protein Feature View
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence

Find similar proteins by: Sequence  |  Structure

Entity ID: 7
MoleculeChainsSequence LengthOrganismDetails
BICD family-like cargo adapter 1,BICD family-like cargo adapter 1,BICDR1X, x577Mus musculusMutation(s): 0 
Gene Names: Bicdl1Bicdr1Ccdc64
Find proteins for A0JNT9 (Mus musculus)
Explore A0JNT9 
Go to UniProtKB:  A0JNT9
NIH Common Fund Data Resources
Protein Feature View
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence

Find similar proteins by: Sequence  |  Structure

Entity ID: 8
MoleculeChainsSequence LengthOrganismDetails
Dynactin subunit 4Y467Sus scrofaMutation(s): 0 
Find proteins for A0A4X1TB62 (Sus scrofa)
Explore A0A4X1TB62 
Go to UniProtKB:  A0A4X1TB62
Protein Feature View
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
ARP1 actin related protein 1 homolog AG, I376Sus scrofaMutation(s): 0 
Gene Names: ACTR1A
Find proteins for F2Z5G5 (Sus scrofa)
Explore F2Z5G5 
Go to UniProtKB:  F2Z5G5
Protein Feature View
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence

Find similar proteins by: Sequence  |  Structure

Entity ID: 4
MoleculeChainsSequence LengthOrganismDetails
Dynactin subunit 2M405Sus scrofaMutation(s): 0 
Gene Names: DCTN2
Find proteins for A0A5G2QD80 (Sus scrofa)
Explore A0A5G2QD80 
Go to UniProtKB:  A0A5G2QD80
Protein Feature View
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ATP
Query on ATP

Download CCD File 
H
ADENOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O13 P3
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
 Ligand Interaction
ADP
Query on ADP

Download CCD File 
G, I, J
ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
 Ligand Interaction
ZN
Query on ZN

Download CCD File 
Y
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Medical Research Council (MRC, United Kingdom)United KingdomMC_UP_A025_1011
Wellcome TrustUnited KingdomWT210711

Revision History 

  • Version 1.0: 2020-07-29
    Type: Initial release