7CG0

Cryo-EM structure of the flagellar proximal rod with FliF peptides from Salmonella

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J [auth f]	F_UNCLASSIFIED	e7cg0f1	A: a+b two layers	X: Flagellar hook protein FlgE D0 domain (From Topology)	H: Flagellar hook protein FlgE D0 domain (From Topology)	T: Flagellar hook protein FlgE D0 domain	F: F_UNCLASSIFIED	ECOD (1.6)
K [auth g]	F_UNCLASSIFIED	e7cg0g1	A: a+b two layers	X: Flagellar hook protein FlgE D0 domain (From Topology)	H: Flagellar hook protein FlgE D0 domain (From Topology)	T: Flagellar hook protein FlgE D0 domain	F: F_UNCLASSIFIED	ECOD (1.6)
L [auth h]	F_UNCLASSIFIED	e7cg0h1	A: a+b two layers	X: Flagellar hook protein FlgE D0 domain (From Topology)	H: Flagellar hook protein FlgE D0 domain (From Topology)	T: Flagellar hook protein FlgE D0 domain	F: F_UNCLASSIFIED	ECOD (1.6)
M [auth j]	F_UNCLASSIFIED	e7cg0j1	A: a+b two layers	X: Flagellar hook protein FlgE D0 domain (From Topology)	H: Flagellar hook protein FlgE D0 domain (From Topology)	T: Flagellar hook protein FlgE D0 domain	F: F_UNCLASSIFIED	ECOD (1.6)
Q [auth p]	F_UNCLASSIFIED	e7cg0p1	A: a+b two layers	X: Flagellar hook protein FlgE D0 domain (From Topology)	H: Flagellar hook protein FlgE D0 domain (From Topology)	T: Flagellar hook protein FlgE D0 domain	F: F_UNCLASSIFIED	ECOD (1.6)
S [auth i]	F_UNCLASSIFIED	e7cg0i1	A: a+b two layers	X: Flagellar hook protein FlgE D0 domain (From Topology)	H: Flagellar hook protein FlgE D0 domain (From Topology)	T: Flagellar hook protein FlgE D0 domain	F: F_UNCLASSIFIED	ECOD (1.6)
N [auth l]	Flg_bb_rod	e7cg0l1	A: a+b two layers	X: Flagellar hook protein FlgE D0 domain (From Topology)	H: Flagellar hook protein FlgE D0 domain (From Topology)	T: Flagellar hook protein FlgE D0 domain	F: Flg_bb_rod	ECOD (1.6)
O [auth m]	Flg_bb_rod	e7cg0m1	A: a+b two layers	X: Flagellar hook protein FlgE D0 domain (From Topology)	H: Flagellar hook protein FlgE D0 domain (From Topology)	T: Flagellar hook protein FlgE D0 domain	F: Flg_bb_rod	ECOD (1.6)
P [auth o]	Flg_bb_rod	e7cg0o1	A: a+b two layers	X: Flagellar hook protein FlgE D0 domain (From Topology)	H: Flagellar hook protein FlgE D0 domain (From Topology)	T: Flagellar hook protein FlgE D0 domain	F: Flg_bb_rod	ECOD (1.6)
T [auth k]	Flg_bb_rod	e7cg0k1	A: a+b two layers	X: Flagellar hook protein FlgE D0 domain (From Topology)	H: Flagellar hook protein FlgE D0 domain (From Topology)	T: Flagellar hook protein FlgE D0 domain	F: Flg_bb_rod	ECOD (1.6)
U [auth n]	Flg_bb_rod	e7cg0n1	A: a+b two layers	X: Flagellar hook protein FlgE D0 domain (From Topology)	H: Flagellar hook protein FlgE D0 domain (From Topology)	T: Flagellar hook protein FlgE D0 domain	F: Flg_bb_rod	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
F [auth 5], G [auth 6], H [auth 7], I [auth 9], R [auth 8]	PF08345	Flagellar M-ring protein C-terminal (YscJ_FliF_C)	Flagellar M-ring protein C-terminal	-	Family
J [auth f], K [auth g], L [auth h], M [auth j], Q [auth p], J [auth f], K [auth g], L [auth h], M [auth j], Q [auth p], S [auth i]	PF00460	Flagella basal body rod protein (Flg_bb_rod)	Flagella basal body rod protein	-	Family
J [auth f], K [auth g], L [auth h], M [auth j], Q [auth p], J [auth f], K [auth g], L [auth h], M [auth j], Q [auth p], S [auth i]	PF06429	Flagellar basal body rod FlgEFG protein C-terminal (Flg_bbr_C)	Flagellar basal body rod FlgEFG protein C-terminal	This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which Pfam:PF00460 is often present at the extreme N terminus.	Domain
N [auth l], O [auth m], P [auth o], T [auth k], U [auth n]	PF00460	Flagella basal body rod protein (Flg_bb_rod)	Flagella basal body rod protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 0], B [auth 1], C [auth 2], D [auth 3], E [auth 4]	Flagellar MS ring L2	-	-	-
F [auth 5], G [auth 6], H [auth 7], I [auth 9], R [auth 8]	Flagellar MS ring L1	cytoskeletal motor activity	bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	cell periphery plasma membrane membrane cellular anatomical entity bacterial-type flagellum basal body cell projection bacterial-type flagellum basal body, MS ring organelle bacterial-type flagellum non-membrane-bounded organelle
J [auth f], K [auth g], L [auth h], M [auth j], Q [auth p], J [auth f], K [auth g], L [auth h], M [auth j], Q [auth p], S [auth i]	Flagellar basal-body rod protein FlgC	-	bacterial-type flagellum-dependent swarming motility bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	bacterial-type flagellum basal body cell projection organelle bacterial-type flagellum basal body, rod cellular anatomical entity bacterial-type flagellum non-membrane-bounded organelle
N [auth l], O [auth m], P [auth o], T [auth k], U [auth n]	Flagellar basal body rod protein FlgB	-	bacterial-type flagellum-dependent swarming motility bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	bacterial-type flagellum basal body cell projection organelle bacterial-type flagellum basal body, rod cellular anatomical entity bacterial-type flagellum non-membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
F [auth 5], G [auth 6], H [auth 7], I [auth 9], R [auth 8]	IPR045851	AMP-binding enzyme, C-terminal domain superfamily	Homologous Superfamily
F [auth 5], G [auth 6], H [auth 7], I [auth 9], R [auth 8]	IPR006182	Flagellar M-ring , N-terminal	Domain
F [auth 5], G [auth 6], H [auth 7], I [auth 9], R [auth 8]	IPR013556	Flagellar M-ring C-terminal	Domain
F [auth 5], G [auth 6], H [auth 7], I [auth 9], R [auth 8]	IPR043427	Lipoprotein YscJ/Flagellar M-ring protein	Family
F [auth 5], G [auth 6], H [auth 7], I [auth 9], R [auth 8]	IPR000067	Flagellar M-ring protein FliF	Family
J [auth f], K [auth g], L [auth h], M [auth j], Q [auth p], J [auth f], K [auth g], L [auth h], M [auth j], Q [auth p], S [auth i]	IPR019776	Flagellar basal body rod protein, conserved site	Conserved Site
J [auth f], K [auth g], L [auth h], M [auth j], Q [auth p], J [auth f], K [auth g], L [auth h], M [auth j], Q [auth p], S [auth i]	IPR006299	Flagellar basal-body rod protein FlgC	Family
J [auth f], K [auth g], L [auth h], M [auth j], Q [auth p], J [auth f], K [auth g], L [auth h], M [auth j], Q [auth p], S [auth i]	IPR010930	Flagellar basal-body/hook protein, C-terminal domain	Domain
J [auth f], K [auth g], L [auth h], M [auth j], Q [auth p], J [auth f], K [auth g], L [auth h], M [auth j], Q [auth p], S [auth i]	IPR001444	Flagellar basal body rod protein, N-terminal	Domain
N [auth l], O [auth m], P [auth o], T [auth k], U [auth n]	IPR019776	Flagellar basal body rod protein, conserved site	Conserved Site
N [auth l], O [auth m], P [auth o], T [auth k], U [auth n]	IPR001444	Flagellar basal body rod protein, N-terminal	Domain
N [auth l], O [auth m], P [auth o], T [auth k], U [auth n]	IPR006300	Flagellar basal-body rod protein FlgB	Family

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.