1S9U

Atomic structure of a putative anaerobic dehydrogenase component

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1s9ua1	All alpha proteins	TorD-like	TorD-like	TorD-like	Putative component of anaerobic dehydrogenases YnfI	(Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ) [TaxId: 99287 ],	SCOPe (2.08)
A	d1s9ua2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ) [TaxId: 99287 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	TorD-like	8026943	4003842	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	TorD-like	8039322	3001633	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Nitrate_red_del	e1s9uA1	A: alpha bundles	X: TorD-like (Pfam 06192) (From Topology)	H: TorD-like (Pfam 06192) (From Topology)	T: TorD-like (Pfam 06192)	F: Nitrate_red_del	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.3480.10	Mainly Alpha	Orthogonal Bundle	TorD-like	TorD-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF02613	Nitrate reductase delta subunit (Nitrate_red_del)	Nitrate reductase delta subunit	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	putative component of anaerobic dehydrogenases	signal sequence binding binding peptide binding	primary metabolic process gene expression chaperone-mediated protein folding macromolecule biosynthetic process protein maturation protein folding biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR028611	Tat proofreading chaperone DmsD	Family
A	IPR020945	DMSO/Nitrate reductase chaperone	Family
A	IPR036411	TorD-like superfamily	Homologous Superfamily
A	IPR050289	TorD/DmsD family chaperones	Family
A	IPR026269	Tat proofreading chaperone DmsD-type	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.