1WDJ
Crystal structure of TT1808 from Thermus thermophilus HB8
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d1wdja_ | Alpha and beta proteins (a/b) | Restriction endonuclease-like | Restriction endonuclease-like | Hypothetical protein TT1808 (TTHA1514) | Hypothetical protein TT1808 (TTHA1514) | (Thermus thermophilus ) [TaxId: 274 ], | SCOPe (2.08) |
| B | d1wdjb_ | Alpha and beta proteins (a/b) | Restriction endonuclease-like | Restriction endonuclease-like | Hypothetical protein TT1808 (TTHA1514) | Hypothetical protein TT1808 (TTHA1514) | (Thermus thermophilus ) [TaxId: 274 ], | SCOPe (2.08) |
| C | d1wdjc_ | Alpha and beta proteins (a/b) | Restriction endonuclease-like | Restriction endonuclease-like | Hypothetical protein TT1808 (TTHA1514) | Hypothetical protein TT1808 (TTHA1514) | (Thermus thermophilus ) [TaxId: 274 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | Hypothetical protein TT1808 (TTHA1514) | 8031054 | 4003494 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Restriction endonuclease-like | 8043432 | 3000104 | SCOP2 (2022-06-29) |
| B | SCOP2B Superfamily | Restriction endonuclease-like | 8043432 | 3000104 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Restriction endonuclease-like | 8043432 | 3000104 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Uma2 | e1wdjA1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: Uma2 | ECOD (1.6) |
| B | Uma2 | e1wdjB1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: Uma2 | ECOD (1.6) |
| C | Uma2 | e1wdjC1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: Uma2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.90.1570.10 | Alpha Beta | Alpha-Beta Complex | tt1808, chain A | tt1808, chain A | CATH (4.3.0) |
| B | 3.90.1570.10 | Alpha Beta | Alpha-Beta Complex | tt1808, chain A | tt1808, chain A | CATH (4.3.0) |
| C | 3.90.1570.10 | Alpha Beta | Alpha-Beta Complex | tt1808, chain A | tt1808, chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF05685 | Putative restriction endonuclease (Uma2) | Putative restriction endonuclease | - | Family |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR011335 | Restriction endonuclease type II-like | Homologous Superfamily | |
| IPR012296 | Nuclease, putative, TT1808 | Homologous Superfamily | |
| IPR008538 | Putative restriction endonuclease | Domain |
