1Q5Z

Crystal Structure of the C-terminal Actin Binding Domain of Salmonella Invasion Protein A (SipA)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1q5za_	All alpha proteins	Invasion protein A (SipA) , C-terminal actin binding domain	Invasion protein A (SipA) , C-terminal actin binding domain	Invasion protein A (SipA) , C-terminal actin binding domain	Invasion protein A (SipA) , C-terminal actin binding domain	(Salmonella enterica subsp. enterica serovar Typhimurium ) [TaxId: 90371 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Invasion protein A (SipA) , C-terminal actin binding domain	8027450	4000695	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Invasion protein A (SipA) , C-terminal actin binding domain	8039829	3001070	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	SipA_2nd	e1q5zA1	A: alpha arrays	X: Invasion protein A (SipA) , C-terminal actin binding domain (From Topology)	H: Invasion protein A (SipA) , C-terminal actin binding domain (From Topology)	T: Invasion protein A (SipA) , C-terminal actin binding domain	F: SipA_2nd	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.4110.10	Mainly Alpha	Orthogonal Bundle	Invasion protein A fold	Salmonella invasion protein A, C-terminal actin-binding domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF22163	Salmonella Invasion protein A, C-terminal actin binding domain (SipA_2nd)	Salmonella Invasion protein A, C-terminal actin binding domain	This domain is found at the C-terminal end of Cell invasion protein SipA (Salmonella Invasion protein A) from Salmonella typhimurium. SipA actin-binding protein that interferes with host cell actin cytoskeleton, and reduce the critical concentration ...	This domain is found at the C-terminal end of Cell invasion protein SipA (Salmonella Invasion protein A) from Salmonella typhimurium. SipA actin-binding protein that interferes with host cell actin cytoskeleton, and reduce the critical concentration for the formation of F-actin, contributing to bacterial invasion. This domain adopts a a compact, heart-shaped fold dominated by a helical secondary structure. It is responsible for the actin-binding and polymerisation activities of the protein [1,2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	SipA	cytoskeletal protein binding actin binding protein binding binding	-	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR015138	Salmonella invasion protein A, N-terminal	Domain
A	IPR023225	Salmonella invasion protein A, chaperone-binding	Homologous Superfamily
A	IPR054043	Cell invasion protein SipA, C-terminal actin binding domain	Domain
A	IPR023224	Salmonella invasion protein A, C-terminal actin-binding domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.