3WRF
The crystal structure of native HypBA1 from Bifidobacterium longum JCM 1217
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | YicI C-terminal domain-like | 8051873 | 3000267 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | GH127 C-terminal domain-like | 8051874 | 3002042 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Six-hairpin glycosidases | 8051872 | 3000970 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | COG3533 | e3wrfA3 | A: beta barrels | X: Glycoside hydrolase family 127 C-terminal domain (From Topology) | H: Glycoside hydrolase family 127 C-terminal domain (From Topology) | T: Glycoside hydrolase family 127 C-terminal domain | F: COG3533 | ECOD (1.6) |
A | Glyco_hydro_127_2nd_1 | e3wrfA4 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycoside hydrolase family 127 middle domain-related (From Topology) | T: Glycoside hydrolase family 127 middle domain-related | F: Glyco_hydro_127_2nd_1 | ECOD (1.6) |
A | Glyco_hydro_127_1st | e3wrfA2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: alpha/alpha toroid (From Topology) | T: alpha/alpha toroid | F: Glyco_hydro_127_1st | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07944 | Beta-L-arabinofuranosidase, GH127 catalytic domain (Beta-AFase-like_GH127_cat) | Beta-L-arabinofuranosidase, GH127 catalytic domain | - | Repeat | |
PF20736 | Beta-L-arabinofuranosidase, GH127 middle domain (Glyco_hydro127M) | Beta-L-arabinofuranosidase, GH127 middle domain | This entry represents the first of two beta sandwich domains found in the beta-L-arabinofuranosidase enzyme, EC:3.2.1.185 [1]. This domain shows a similarity to C-terminal domains of GH44, GH27, and GH39 enzymes [1]. | Domain | |
PF20737 | Glycoside hydrolase family 127 C-terminal domain (Glyco_hydro127C) | Glycoside hydrolase family 127 C-terminal domain | This entry represents the second beta sandwich domain found in enzymes belonging to the glycosyl hydrolase 127 family [1]. The beta-sandwich domain is somewhat similar to the N-terminal domain of ErbB4 kinase and is involved in formation of a dimer, ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Non-reducing end beta-L-arabinofuranosidase | - |