5L6L
Structure of Caulobacter crescentus VapBC1 bound to operator DNA
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | UNK_F_TYPE | e5l6lA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: AbrB | F: UNK_F_TYPE | ECOD (1.6) |
D | UNK_F_TYPE | e5l6lD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: AbrB | F: UNK_F_TYPE | ECOD (1.6) |
E | UNK_F_TYPE | e5l6lE1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: AbrB | F: UNK_F_TYPE | ECOD (1.6) |
H | UNK_F_TYPE | e5l6lH1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: AbrB | F: UNK_F_TYPE | ECOD (1.6) |
B | PIN | e5l6lB1 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: PIN domain-like | F: PIN | ECOD (1.6) |
C | PIN | e5l6lC1 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: PIN domain-like | F: PIN | ECOD (1.6) |
F | PIN | e5l6lF1 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: PIN domain-like | F: PIN | ECOD (1.6) |
G | PIN | e5l6lG1 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: PIN domain-like | F: PIN | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.40.50.1010 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | 5'-nuclease | CATH (4.3.0) |
C | 3.40.50.1010 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | 5'-nuclease | CATH (4.3.0) |
F | 3.40.50.1010 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | 5'-nuclease | CATH (4.3.0) |
G | 3.40.50.1010 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | 5'-nuclease | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
VapB family protein | - | - | - | |
Ribonuclease VapC | - | - | ||
I [auth M] | DNA (27-MER) | - | - | - |
J [auth N] | DNA (27-MER) | - | - | - |