6U1O
Structure of two-domain translational regulator Yih1 reveals a possible mechanism of action
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | UPF0029 | e6u1oA1 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: UPF0029 | ECOD (1.6) |
A | RWD | e6u1oA2 | A: a+b two layers | X: UBC-like | H: UBC-like (From Topology) | T: UBC-like | F: RWD | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.110.10 | Alpha Beta | Roll | Ubiquitin Conjugating Enzyme | Ubiquitin Conjugating Enzyme | CATH (utative) |
A | 3.30.230.30 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S5 | domain 2 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01205 | Uncharacterized protein family UPF0029 (UPF0029) | Uncharacterized protein family UPF0029 | - | Family | |
PF05773 | RWD domain (RWD) | RWD domain | This domain was identified in WD40 repeat proteins and Ring finger domain proteins [1]. The function of this domain is unknown. GCN2 is the alpha-subunit of the only translation initiation factor (eIF2 alpha) kinase that appears in all eukaryotes. It ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036956 | Impact, N-terminal domain superfamily | Homologous Superfamily | |
IPR016135 | Ubiquitin-conjugating enzyme/RWD-like | Homologous Superfamily | |
IPR023582 | Impact family | Family | |
IPR006575 | RWD domain | Domain | |
IPR020568 | Ribosomal protein uS5 domain 2-type superfamily | Homologous Superfamily | |
IPR001498 | Impact, N-terminal | Domain | |
IPR020569 | Uncharacterised protein family UPF0029, Impact, conserved site | Conserved Site |