Annotations: 6ZMM

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Hydrolase_4_1	e6zmmA1	A: a/b three-layered sandwiches	X: alpha/beta-Hydrolases (From Topology)	H: alpha/beta-Hydrolases (From Topology)	T: alpha/beta-Hydrolases	F: Hydrolase_4_1	ECOD (1.6)
B	Hydrolase_4_1	e6zmmB1	A: a/b three-layered sandwiches	X: alpha/beta-Hydrolases (From Topology)	H: alpha/beta-Hydrolases (From Topology)	T: alpha/beta-Hydrolases	F: Hydrolase_4_1	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF03096	Ndr family (Ndr)	Ndr family	This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted [1]. The precise molecular and cellular function of members of this family is still unknown. Yet, they are known to be ...	This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted [1]. The precise molecular and cellular function of members of this family is still unknown. Yet, they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (sunflower), known as Sf21 Swiss:O23969. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases Pfam:PF00561, suggesting that this family may have an enzymatic function (Bateman A pers. obs.).	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Protein NDRG1	small GTPase binding protein binding binding enzyme binding GTPase binding cytoskeletal protein binding gamma-tubulin binding tubulin binding microtubule binding cell adhesion molecule binding cadherin binding	multicellular organismal process immune system process cell activation mast cell activation cellular process myeloid leukocyte activation leukocyte activation negative regulation of cell population proliferation regulation of biological process cell population proliferation regulation of cellular process regulation of cell population proliferation negative regulation of cellular process biological regulation multicellular organismal process immune system process cell activation mast cell activation cellular process myeloid leukocyte activation leukocyte activation negative regulation of cell population proliferation regulation of biological process cell population proliferation regulation of cellular process regulation of cell population proliferation negative regulation of cellular process biological regulation negative regulation of biological process response to decreased oxygen levels cellular response to stimulus response to stimulus cellular response to oxygen levels cellular response to hypoxia cellular response to decreased oxygen levels cellular response to chemical stimulus cellular response to stress response to hypoxia response to stress response to chemical response to oxygen levels response to abiotic stimulus signaling signal transduction by p53 class mediator DNA damage response, signal transduction by p53 class mediator intracellular signal transduction cell communication DNA damage response signal transduction in response to DNA damage signal transduction response to metal ion cellular developmental process peripheral nervous system axon ensheathment cell development glial cell development cellular component organization multicellular organism development neurogenesis gliogenesis axon ensheathment ensheathment of neurons cell differentiation plasma membrane organization anatomical structure development myelination in peripheral nervous system peripheral nervous system myelin maintenance cellular component organization or biogenesis Schwann cell differentiation endomembrane system organization system development developmental process membrane organization peripheral nervous system development nervous system development myelination Schwann cell development glial cell differentiation myelin maintenance	cell-cell junction adherens junction cellular anatomical structure anchoring junction cell junction endosome membrane membrane-bounded organelle intracellular anatomical structure membrane endosome intracellular vesicle intracellular membrane-bounded organelle recycling endosome endomembrane system cell-cell junction adherens junction cellular anatomical structure anchoring junction cell junction endosome membrane membrane-bounded organelle intracellular anatomical structure membrane endosome intracellular vesicle intracellular membrane-bounded organelle recycling endosome endomembrane system intracellular organelle cytoplasmic vesicle membrane bounding membrane of organelle recycling endosome membrane vesicle membrane cytoplasmic vesicle organelle cytoplasm vesicle organelle membrane extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular space extracellular membrane-bounded organelle centrosome microtubule organizing center cytoskeleton membraneless organelle intracellular membraneless organelle microtubule cytoskeleton cytosol perinuclear region of cytoplasm cell periphery plasma membrane polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer supramolecular complex nucleus

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR004142	NDRG	Family
A, B	IPR029058	Alpha/Beta hydrolase fold	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: Q92597	Charcot-Marie-Tooth disease type 4D Charcot-Marie-Tooth disease glioblastoma non-small cell lung carcinoma hemangioblastoma renal cell carcinoma melanoma pancreatic ductal adenocarcinoma breast carcinoma subependymal giant cell astrocytoma oropharynx cancer head and neck squamous cell carcinoma peripheral neuropathy prostate cancer Liver Cirrhosis, Experimental Charcot-Marie-Tooth disease type 4D Charcot-Marie-Tooth disease glioblastoma non-small cell lung carcinoma hemangioblastoma renal cell carcinoma melanoma pancreatic ductal adenocarcinoma breast carcinoma subependymal giant cell astrocytoma oropharynx cancer head and neck squamous cell carcinoma peripheral neuropathy prostate cancer Liver Cirrhosis, Experimental anaplastic astrocytoma smooth muscle tumor gemistocytic astrocytoma papillary renal cell carcinoma pilocytic astrocytoma juvenile pilocytic astrocytoma astrocytic tumor breast cancer childhood cerebral astrocytoma collecting duct carcinoma giant cell glioblastoma liver cancer protoplasmic astrocytoma sarcomatoid renal cell carcinoma small cell lung carcinoma chromophobe renal cell carcinoma fibrillary astrocytoma pancreatic intraductal papillary-mucinous carcinoma kidney neoplasm renal carcinoma malignant colon neoplasm small cell carcinoma atypical teratoid rhabdoid tumor breast fibroadenoma medulloblastoma tuberculosis motor peripheral neuropathy clear cell renal carcinoma cutaneous melanoma ovarian cancer large cell medulloblastoma liver neoplasm cerebral astrocytoma ulcerative colitis neoplasm of oropharynx diffuse astrocytoma oral cavity neoplasm Hashimoto thyroiditis peripheral nervous system disease intellectual disability primitive neuroectodermal tumor kidney cancer lung cancer astrocytoma (excluding glioblastoma) neurodegenerative disease

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.