7NQK
Cryo-EM structure of the mammalian peptide transporter PepT2
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- SAbDab Antibody Annotation
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | 2A1704_1st | e7nqkA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: 2A1704_1st | ECOD (1.6) |
A | 2A1704_2nd | e7nqkA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: 2A1704_2nd | ECOD (1.6) |
A | PTR2 | e7nqkA4 | A: alpha complex topology | X: Major facilitator superfamily (MFS) general substrate transporter (From Topology) | H: Major facilitator superfamily (MFS) general substrate transporter (From Topology) | T: Major facilitator superfamily (MFS) general substrate transporter | F: PTR2 | ECOD (1.6) |
B | V-set_12 | e7nqkB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_12 | ECOD (1.6) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
Heavy Chain | IGHV1 | - | solute carrier family 15 member 2 | SAbDab (2025-03-07) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00854 | POT family (PTR2) | POT family | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000109 | Proton-dependent oligopeptide transporter family | Family | |
IPR029028 | Alpha/beta knot methyltransferases | Homologous Superfamily | |
IPR004768 | Oligopeptide transporter | Family | |
IPR018456 | PTR2 family proton/oligopeptide symporter, conserved site | Conserved Site | |
IPR036259 | MFS transporter superfamily | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Major Facilitator Superfamily (MFS) | Proton-dependent oligopeptide transporter (POT) |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Solute Carrier (SLC) Transporter Superfamily | SLC15A2 proton-coupled peptide transporter (PepT2) |