Annotations: 7W1M

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	beta-beta-alpha zinc fingers	8039269	3001077	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	beta-beta-alpha zinc fingers	8039270	3001077	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF02463	RecF/RecN/SMC N terminal domain (SMC_N)	RecF/RecN/SMC N terminal domain	This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. Th ...	This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics [1]. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.	Domain
B	PF02463	RecF/RecN/SMC N terminal domain (SMC_N)	RecF/RecN/SMC N terminal domain	This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. Th ...	This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics [1]. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.	Domain
C	PF04824	Conserved region of Rad21 / Rec8 like protein (Rad21_Rec8)	Conserved region of Rad21 / Rec8 like protein	-	Family
D	PF21581	Stromalin conservative domain (SCD)	Stromalin conservative domain	-	Repeat
D	PF08514	STAG domain (STAG)	STAG domain	-	Repeat
E	PF12765	HEAT repeat associated with sister chromatid cohesion (Cohesin_HEAT)	HEAT repeat associated with sister chromatid cohesion	-	Repeat
E	PF12830	Sister chromatid cohesion C-terminus (Nipped-B_C)	Sister chromatid cohesion C-terminus	-	Repeat
H	PF00096	Zinc finger, C2H2 type (zf-C2H2)	Zinc finger, C2H2 type	The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, an ...	The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Structural maintenance of chromosomes protein 1A	chromatin binding binding protein heterodimerization activity protein binding protein dimerization activity RNA binding nucleic acid binding protein-containing complex binding mediator complex binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding chromatin binding binding protein heterodimerization activity protein binding protein dimerization activity RNA binding nucleic acid binding protein-containing complex binding mediator complex binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding DNA binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity	cellular process cell division cellular response to biotic stimulus cellular response to stimulus cellular response to endogenous stimulus response to stimulus response to DNA integrity checkpoint signaling response to DNA damage checkpoint signaling response to endogenous stimulus response to cell cycle checkpoint signaling response to biotic stimulus response to radiation response to abiotic stimulus cellular component organization cellular process cell division cellular response to biotic stimulus cellular response to stimulus cellular response to endogenous stimulus response to stimulus response to DNA integrity checkpoint signaling response to DNA damage checkpoint signaling response to endogenous stimulus response to cell cycle checkpoint signaling response to biotic stimulus response to radiation response to abiotic stimulus cellular component organization organelle organization chromosome organization sister chromatid cohesion cellular component organization or biogenesis cell cycle cell cycle process mitotic nuclear division organelle fission sister chromatid segregation mitotic cell cycle nuclear division mitotic cell cycle process mitotic sister chromatid segregation nuclear chromosome segregation chromosome segregation mitotic sister chromatid cohesion establishment of mitotic sister chromatid cohesion establishment of sister chromatid cohesion primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress metabolic process macromolecule metabolic process DNA repair establishment of meiotic sister chromatid cohesion meiotic sister chromatid cohesion microtubule cytoskeleton organization membraneless organelle assembly cellular component biogenesis cellular component assembly microtubule cytoskeleton organization involved in mitosis spindle organization organelle assembly spindle assembly mitotic spindle organization mitotic spindle assembly microtubule-based process cytoskeleton organization developmental process multicellular organismal process somatic stem cell population maintenance maintenance of cell number stem cell population maintenance sexual reproduction reproductive process meiotic cell cycle	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle nuclear periphery nuclear lumen nuclear matrix condensed nuclear chromosome membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle nuclear periphery nuclear lumen nuclear matrix condensed nuclear chromosome intracellular membraneless organelle nuclear chromosome chromosome membraneless organelle condensed chromosome cytoplasm cytosol chromosome, centromeric region chromosomal region protein-containing complex mitotic cohesin complex cohesin complex nucleoplasm kinetochore condensed chromosome, centromeric region supramolecular complex mitotic spindle spindle cytoskeleton mitotic spindle pole spindle pole microtubule cytoskeleton meiotic cohesin complex
B	Structural maintenance of chromosomes protein 3	chromatin binding binding microtubule motor activity cytoskeletal motor activity ATP-dependent activity protein heterodimerization activity protein binding protein dimerization activity protein-containing complex binding mediator complex binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding chromatin binding binding microtubule motor activity cytoskeletal motor activity ATP-dependent activity protein heterodimerization activity protein binding protein dimerization activity protein-containing complex binding mediator complex binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding DNA binding double-stranded DNA binding nucleic acid binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity cytoskeletal protein binding beta-tubulin binding tubulin binding dynein complex binding	cellular process cell cycle mitotic cell cycle cell division regulation of biological process regulation of cellular process biological regulation primary metabolic process DNA metabolic process regulation of macromolecule metabolic process nucleic acid metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process DNA replication cellular process cell cycle mitotic cell cycle cell division regulation of biological process regulation of cellular process biological regulation primary metabolic process DNA metabolic process regulation of macromolecule metabolic process nucleic acid metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process DNA replication metabolic process macromolecule metabolic process regulation of nucleobase-containing compound metabolic process regulation of metabolic process regulation of DNA replication regulation of DNA metabolic process cellular component organization organelle organization chromosome organization sister chromatid cohesion cellular component organization or biogenesis cell cycle process mitotic sister chromatid cohesion establishment of mitotic sister chromatid cohesion mitotic cell cycle process establishment of sister chromatid cohesion developmental process multicellular organismal process maintenance of cell number stem cell population maintenance cellular response to stimulus response to stimulus cellular response to stress DNA damage response response to stress DNA repair establishment of meiotic sister chromatid cohesion meiotic sister chromatid cohesion microtubule cytoskeleton organization membraneless organelle assembly cellular component biogenesis cellular component assembly mitotic sister chromatid segregation chromosome segregation microtubule cytoskeleton organization involved in mitosis spindle organization mitotic nuclear division organelle assembly organelle fission sister chromatid segregation spindle assembly mitotic spindle organization mitotic spindle assembly nuclear division nuclear chromosome segregation microtubule-based process cytoskeleton organization sexual reproduction reproductive process meiotic cell cycle	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle nuclear periphery nuclear lumen nuclear matrix cytoplasm membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle nuclear periphery nuclear lumen nuclear matrix cytoplasm cytosol membraneless organelle chromosome, centromeric region intracellular membraneless organelle chromosome chromosomal region protein-containing complex mitotic cohesin complex cohesin complex nucleoplasm chromatin condensed nuclear chromosome nuclear chromosome lateral element synaptonemal structure synaptonemal complex condensed chromosome mitotic spindle spindle cytoskeleton mitotic spindle pole spindle pole microtubule cytoskeleton meiotic cohesin complex
C	Double-strand-break repair protein rad21 homolog	RNA binding binding lncRNA binding nucleic acid binding chromatin binding DNA binding transcription factor binding protein binding DNA-binding transcription factor binding	cellular response to stimulus double-strand break repair response to stimulus DNA recombination primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process replication-born double-strand break repair via sister chromatid exchange cellular response to stress DNA damage response response to stress recombinational repair metabolic process cellular response to stimulus double-strand break repair response to stimulus DNA recombination primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process replication-born double-strand break repair via sister chromatid exchange cellular response to stress DNA damage response response to stress recombinational repair metabolic process cellular process macromolecule metabolic process double-strand break repair via homologous recombination DNA repair multicellular organismal process regulation of tumor necrosis factor production regulation of cellular process negative regulation of biological process negative regulation of tumor necrosis factor production cytokine production regulation of cytokine production negative regulation of cellular process regulation of multicellular organismal process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process negative regulation of metabolic process biological regulation tumor necrosis factor superfamily cytokine production negative regulation of cytokine production regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process tumor necrosis factor production regulation of gene expression negative regulation of gene expression regulation of tumor necrosis factor superfamily cytokine production biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of tumor necrosis factor superfamily cytokine production regulation of macromolecule biosynthetic process negative regulation of multicellular organismal process regulation of metabolic process homologous recombination sexual reproduction reproductive process meiotic cell cycle process cellular component organization meiosis I meiotic nuclear division cell cycle cellular component organization or biogenesis reciprocal homologous recombination cell cycle process meiotic cell cycle organelle fission reciprocal meiotic recombination nuclear division organelle organization meiosis I cell cycle process cell division regulation of cell cycle phase transition G2/M transition of mitotic cell cycle negative regulation of cell cycle cell cycle phase transition mitotic cell cycle negative regulation of mitotic cell cycle regulation of mitotic cell cycle negative regulation of cell cycle phase transition regulation of cell cycle cell cycle G2/M phase transition negative regulation of mitotic cell cycle phase transition regulation of G2/M transition of mitotic cell cycle regulation of cell cycle process regulation of cell cycle G2/M phase transition negative regulation of cell cycle process regulation of mitotic cell cycle phase transition mitotic cell cycle process negative regulation of cell cycle G2/M phase transition negative regulation of G2/M transition of mitotic cell cycle mitotic cell cycle phase transition chromosome segregation protein localization localization protein localization to chromatin cellular localization protein localization to chromosome protein localization to organelle cellular macromolecule localization macromolecule localization apoptotic process cell death programmed cell death interleukin-1 production regulation of interleukin-1 beta production negative regulation of interleukin-1 beta production negative regulation of interleukin-1 production regulation of interleukin-1 production interleukin-1 beta production chromosome organization sister chromatid cohesion positive regulation of organelle organization regulation of cellular component organization positive regulation of cellular component organization positive regulation of biological process positive regulation of cell cycle process positive regulation of cellular process regulation of chromosome organization positive regulation of sister chromatid cohesion regulation of organelle organization positive regulation of cell cycle positive regulation of chromosome organization regulation of sister chromatid cohesion mitotic sister chromatid cohesion establishment of mitotic sister chromatid cohesion establishment of sister chromatid cohesion neuron apoptotic process negative regulation of neuron apoptotic process negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death negative regulation of apoptotic process regulation of neuron apoptotic process chromatin looping chromatin organization interleukin-10 production positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of interleukin-10 production positive regulation of interleukin-10 production positive regulation of gene expression positive regulation of multicellular organismal process positive regulation of cytokine production response to decreased oxygen levels response to hypoxia response to oxygen levels response to abiotic stimulus establishment of meiotic sister chromatid cohesion meiotic sister chromatid cohesion regulation of glial cell apoptotic process negative regulation of glial cell apoptotic process glial cell apoptotic process RNA metabolic process regulation of primary metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II nucleobase-containing compound biosynthetic process regulation of DNA-templated transcription regulation of mitotic nuclear division negative regulation of mitotic sister chromatid segregation negative regulation of chromosome organization mitotic sister chromatid separation negative regulation of sister chromatid segregation negative regulation of cellular component organization sister chromatid segregation regulation of mitotic sister chromatid segregation regulation of chromosome separation negative regulation of mitotic nuclear division regulation of chromosome segregation regulation of mitotic sister chromatid separation regulation of metaphase/anaphase transition of cell cycle regulation of mitotic metaphase/anaphase transition mitotic sister chromatid segregation negative regulation of mitotic metaphase/anaphase transition negative regulation of chromosome separation mitotic nuclear division negative regulation of chromosome segregation negative regulation of nuclear division negative regulation of organelle organization chromosome separation regulation of sister chromatid segregation negative regulation of mitotic sister chromatid separation regulation of nuclear division negative regulation of metaphase/anaphase transition of cell cycle nuclear chromosome segregation metaphase/anaphase transition of mitotic cell cycle metaphase/anaphase transition of cell cycle	midbody cellular anatomical structure membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle organelle lumen organelle nuclear periphery nuclear lumen nuclear matrix midbody cellular anatomical structure membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle organelle lumen organelle nuclear periphery nuclear lumen nuclear matrix cytoskeleton spindle membraneless organelle intracellular membraneless organelle spindle pole microtubule cytoskeleton membrane condensed nuclear chromosome nuclear chromosome chromosome condensed chromosome cytoplasm cytosol chromosome, centromeric region chromosomal region protein-containing complex mitotic cohesin complex cohesin complex nucleoplasm chromatin meiotic cohesin complex
D	Cohesin subunit SA-1	chromatin binding binding	cellular process cell division microtubule cytoskeleton organization membraneless organelle assembly mitotic cell cycle cellular component organization cellular component biogenesis cellular component assembly mitotic sister chromatid segregation cell cycle cellular component organization or biogenesis chromosome segregation microtubule cytoskeleton organization involved in mitosis spindle organization cellular process cell division microtubule cytoskeleton organization membraneless organelle assembly mitotic cell cycle cellular component organization cellular component biogenesis cellular component assembly mitotic sister chromatid segregation cell cycle cellular component organization or biogenesis chromosome segregation microtubule cytoskeleton organization involved in mitosis spindle organization cell cycle process mitotic nuclear division organelle assembly organelle fission chromosome organization sister chromatid segregation spindle assembly mitotic spindle organization mitotic spindle assembly organelle organization nuclear division mitotic cell cycle process nuclear chromosome segregation microtubule-based process cytoskeleton organization sister chromatid cohesion mitotic sister chromatid cohesion establishment of mitotic sister chromatid cohesion establishment of sister chromatid cohesion	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle nuclear periphery nuclear lumen nuclear matrix membraneless organelle membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle nuclear periphery nuclear lumen nuclear matrix membraneless organelle intracellular membraneless organelle chromosome cytoplasm cytosol chromosome, centromeric region chromosomal region protein-containing complex cohesin complex mitotic spindle spindle cytoskeleton mitotic spindle pole spindle pole microtubule cytoskeleton mitotic cohesin complex nuclear body nucleoplasm chromatin
E	Nipped-B-like protein	histone deacetylase binding protein binding binding enzyme binding protein-containing complex binding mediator complex binding chromo shadow domain binding protein domain specific binding chromatin binding promoter-specific chromatin binding cohesin loader activity catalytic activity, acting on DNA catalytic activity, acting on a nucleic acid catalytic activity histone deacetylase binding protein binding binding enzyme binding protein-containing complex binding mediator complex binding chromo shadow domain binding protein domain specific binding chromatin binding promoter-specific chromatin binding cohesin loader activity catalytic activity, acting on DNA catalytic activity, acting on a nucleic acid catalytic activity transcription corepressor activity transcription regulator activity transcription coregulator activity protein-macromolecule adaptor activity molecular adaptor activity	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process developmental process multicellular organism development multicellular organismal process head development central nervous system development anatomical structure development animal organ development brain development cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process developmental process multicellular organism development multicellular organismal process head development central nervous system development anatomical structure development animal organ development brain development nervous system development system development limb development appendage development embryonic forelimb morphogenesis embryonic limb morphogenesis embryonic morphogenesis embryonic appendage morphogenesis embryo development anatomical structure morphogenesis forelimb morphogenesis appendage morphogenesis limb morphogenesis embryonic organ morphogenesis embryonic viscerocranium morphogenesis embryonic cranial skeleton morphogenesis chordate embryonic development embryo development ending in birth or egg hatching skeletal system development cranial skeletal system development animal organ morphogenesis embryonic skeletal system development skeletal system morphogenesis embryonic organ development embryonic skeletal system morphogenesis protein localization localization cellular localization cellular macromolecule localization macromolecule localization reproductive system development reproductive process uterus development developmental process involved in reproduction uterus morphogenesis reproductive structure development system process nervous system process cognition mitotic sister chromatid cohesion chromosome organization sister chromatid cohesion maintenance of sister chromatid cohesion cellular component organization organelle organization maintenance of mitotic sister chromatid cohesion cellular component organization or biogenesis cell cycle cell cycle process response to X-ray cellular response to ionizing radiation cellular response to radiation cellular response to environmental stimulus cellular response to X-ray response to ionizing radiation response to radiation response to abiotic stimulus cellular response to abiotic stimulus heart development heart morphogenesis circulatory system development regulation of biological process hair cycle molting cycle biological regulation regulation of hair cycle regulation of multicellular organismal process fat cell differentiation cellular developmental process cell differentiation metanephros development kidney development renal system development sensory perception sensory perception of sound sensory perception of mechanical stimulus somatic stem cell population maintenance maintenance of cell number stem cell population maintenance sensory organ development eye development visual system development eye morphogenesis sensory organ morphogenesis sensory system development regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process transcription by RNA polymerase II negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of metabolic process primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process negative regulation of RNA metabolic process positive regulation of DNA-templated transcription positive regulation of biological process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of cellular process positive regulation of nucleobase-containing compound metabolic process positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process double-strand break repair DNA recombination DNA metabolic process replication-born double-strand break repair via sister chromatid exchange recombinational repair double-strand break repair via homologous recombination DNA repair hepaticobiliary system development gallbladder development face morphogenesis head morphogenesis face development body morphogenesis digestive system development tube development digestive tract development positive regulation of locomotion regulation of cell motility regulation of neuron migration positive regulation of cell migration neurogenesis positive regulation of cell motility regulation of cell migration cell migration cell motility locomotion neuron migration generation of neurons regulation of locomotion positive regulation of neuron migration mitotic nuclear division organelle fission sister chromatid segregation mitotic cell cycle nuclear division mitotic cell cycle process mitotic sister chromatid segregation nuclear chromosome segregation chromosome segregation developmental growth growth ear morphogenesis ear development establishment of mitotic sister chromatid cohesion establishment of sister chromatid cohesion regulation of growth regulation of developmental growth regulation of developmental process genitalia development external genitalia morphogenesis sex differentiation genitalia morphogenesis regulation of multicellular organism growth positive regulation of multicellular organism growth positive regulation of developmental process multicellular organism growth positive regulation of growth positive regulation of multicellular organismal process positive regulation of developmental growth embryonic digestive tract morphogenesis tube morphogenesis digestive tract morphogenesis embryonic digestive tract development ossification positive regulation of ossification regulation of ossification regulation of embryonic development regulation of multicellular organismal development establishment of protein localization protein localization to chromatin establishment of protein localization to chromatin establishment of localization establishment of protein localization to organelle protein localization to chromosome protein localization to organelle establishment of protein localization to chromosome chromatin organization chromatin remodeling outflow tract morphogenesis	extracellular exosome membrane-bounded organelle extracellular vesicle cellular anatomical structure extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol intracellular organelle extracellular exosome membrane-bounded organelle extracellular vesicle cellular anatomical structure extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol intracellular organelle protein-containing complex integrator complex nucleus nuclear protein-containing complex intracellular membrane-bounded organelle membraneless organelle intracellular membraneless organelle chromatin chromosome SMC loading complex Scc2-Scc4 cohesin loading complex membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen
F	DNA (118-MER)	-	-	-
G	DNA (118-MER)	-	-	-
H	Transcriptional repressor CTCF	DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription repressor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription repressor activity DNA-binding transcription factor activity DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription repressor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription repressor activity DNA-binding transcription factor activity DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding RNA polymerase II cis-regulatory region sequence-specific DNA binding transcription factor binding transcription coregulator binding protein binding chromatin binding DNA-DNA tethering activity chromatin DNA binding chromatin loop anchoring activity molecular adaptor activity chromatin insulator sequence binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding	regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process negative regulation of DNA-templated transcription regulation of biological process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process negative regulation of RNA metabolic process negative regulation of gene expression via chromosomal CpG island methylation cellular component organization chromatin organization chromatin remodeling cellular component organization or biogenesis epigenetic regulation of gene expression negative regulation of gene expression negative regulation of gene expression, epigenetic positive regulation of biological process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of gene expression positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of cellular process protein localization localization cellular localization protein localization to chromosome, centromeric region protein localization to chromosome protein localization to organelle cellular macromolecule localization macromolecule localization cell cycle chromosome segregation cell cycle process developmental process multicellular organism development multicellular organismal process embryo development ending in birth or egg hatching chordate embryonic development anatomical structure development embryo development in utero embryonic development heterochromatin formation constitutive heterochromatin formation DNA methylation-dependent constitutive heterochromatin formation chromatin looping regulation of cellular component organization regulation of cell cycle process chromosome organization sister chromatid cohesion regulation of chromosome organization regulation of organelle organization centromeric sister chromatid cohesion organelle organization regulation of centromeric sister chromatid cohesion regulation of sister chromatid cohesion regulation of cell cycle negative regulation of cell population proliferation cell population proliferation regulation of cell population proliferation cardiac muscle cell development cellular developmental process cell development muscle cell differentiation striated muscle tissue development muscle structure development striated muscle cell development muscle cell development cell differentiation cardiac cell development muscle tissue development system development heart development cardiac muscle tissue development animal organ development cardiac muscle cell differentiation tissue development cardiocyte differentiation circulatory system development striated muscle cell differentiation positive regulation of DNA-templated transcription positive regulation of nucleobase-containing compound metabolic process positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process sexual reproduction reproductive process cellular process involved in reproduction in multicellular organism developmental process involved in reproduction gamete generation epigenetic programming of gene expression multicellular organismal reproductive process genomic imprinting germ cell development transcription by RNA polymerase II regulation of transcription by RNA polymerase II negative regulation of transcription by RNA polymerase II mitochondrion organization positive regulation of transcription by RNA polymerase II	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen chromosome condensed chromosome chromosome, centromeric region chromosomal region nucleoplasm male germ cell nucleus germ cell nucleus

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR028468	Smc1, ATP-binding cassette domain	Domain
A	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A	IPR010935	SMCs flexible hinge	Domain
A	IPR036277	SMCs flexible hinge superfamily	Homologous Superfamily
A	IPR003395	RecF/RecN/SMC, N-terminal	Domain
A	IPR024704	Structural maintenance of chromosomes protein	Family
B	IPR041741	Structural maintenance of chromosomes 3, ABC domain, eukaryotic	Domain
B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
B	IPR010935	SMCs flexible hinge	Domain
B	IPR036277	SMCs flexible hinge superfamily	Homologous Superfamily
B	IPR003395	RecF/RecN/SMC, N-terminal	Domain
B	IPR024704	Structural maintenance of chromosomes protein	Family
C	IPR023093	ScpA-like, C-terminal	Homologous Superfamily
C	IPR049589	NXP-1, middle HEAT-repeat binding domain	Domain
C	IPR039781	Rad21/Rec8-like protein	Family
C	IPR006910	Rad21/Rec8-like protein, N-terminal	Domain
C	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
C	IPR006909	Rad21/Rec8-like protein, C-terminal, eukaryotic	Domain
D	IPR039662	Cohesin subunit Scc3/SA	Family
D	IPR016024	Armadillo-type fold	Homologous Superfamily
D	IPR020839	Stromalin conservative domain	Domain
D	IPR013721	STAG	Domain
E	IPR033031	Scc2/Nipped-B family	Family
E	IPR016024	Armadillo-type fold	Homologous Superfamily
E	IPR011989	Armadillo-like helical	Homologous Superfamily
E	IPR024986	Sister chromatid cohesion C-terminal domain	Domain
E	IPR026003	HEAT repeat associated with sister chromatid cohesion protein	Repeat
H	IPR013087	Zinc finger C2H2-type	Domain
H	IPR036236	Zinc finger C2H2 superfamily	Homologous Superfamily
H	IPR050331	Zinc finger	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q14683	Cornelia de Lange syndrome myeloid leukemia Cornelia de Lange syndrome 2 adenoid cystic carcinoma salivary gland adenoid cystic carcinoma epilepsy chronic monocytic leukemia urinary bladder cancer intellectual disability lung adenocarcinoma malignant glioma myopathy neurofibromatosis type 1 osteosarcoma atypical teratoid rhabdoid tumor Cornelia de Lange syndrome myeloid leukemia Cornelia de Lange syndrome 2 adenoid cystic carcinoma salivary gland adenoid cystic carcinoma epilepsy chronic monocytic leukemia urinary bladder cancer intellectual disability lung adenocarcinoma malignant glioma myopathy neurofibromatosis type 1 osteosarcoma atypical teratoid rhabdoid tumor pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia congenital anemia primitive neuroectodermal tumor Cornelia de Lange syndrome 3 Roberts syndrome Down syndrome urinary bladder neoplasm glioblastoma juvenile dermatomyositis lymphoplasmacytic lymphoma medulloblastoma nasopharyngeal carcinoma oligodendroglioma adenoma ovarian cancer breast cancer pilocytic astrocytoma psoriasis Cytopenia Wiedemann-Steiner syndrome large cell medulloblastoma malignant ependymoma osteogenesis imperfecta astrocytic tumor pancreatic intraductal papillary-mucinous carcinoma dermatomyositis
B	Pharos: Q9UQE7	Cornelia de Lange syndrome Cornelia de Lange syndrome 3 myeloid leukemia chronic monocytic leukemia intellectual disability Neurodevelopmental Disorders psoriasis Roberts syndrome adrenal cortex carcinoma congenital anemia lung cancer medulloblastoma non-small cell lung carcinoma ovarian cancer primitive neuroectodermal tumor Cornelia de Lange syndrome Cornelia de Lange syndrome 3 myeloid leukemia chronic monocytic leukemia intellectual disability Neurodevelopmental Disorders psoriasis Roberts syndrome adrenal cortex carcinoma congenital anemia lung cancer medulloblastoma non-small cell lung carcinoma ovarian cancer primitive neuroectodermal tumor atypical teratoid rhabdoid tumor malignant glioma osteogenesis imperfecta periodontitis progressive supranuclear palsy rheumatoid arthritis Cornelia de Lange syndrome 2 malignant mesothelioma osteosarcoma
C	Pharos: O60216	Cornelia de Lange syndrome myeloid leukemia Leukemia, Megakaryoblastic, of Down Syndrome Cornelia de Lange syndrome 4 chronic monocytic leukemia intellectual disability lung carcinoma malignant mesothelioma medulloblastoma oligodendroglioma acute myeloid leukemia breast cancer rheumatoid arthritis colorectal adenoma endometrium carcinoma in situ Cornelia de Lange syndrome myeloid leukemia Leukemia, Megakaryoblastic, of Down Syndrome Cornelia de Lange syndrome 4 chronic monocytic leukemia intellectual disability lung carcinoma malignant mesothelioma medulloblastoma oligodendroglioma acute myeloid leukemia breast cancer rheumatoid arthritis colorectal adenoma endometrium carcinoma in situ invasive ductal breast carcinoma lung adenocarcinoma Mungan syndrome osteosarcoma astrocytic tumor primitive neuroectodermal tumor Roberts syndrome colorectal cancer Cornelia de Lange syndrome 2 glioblastoma large cell medulloblastoma lung cancer malignant ependymoma plasma cell myeloma atypical teratoid rhabdoid tumor colorectal adenocarcinoma trichorhinophalangeal syndrome type II congenital anemia Cornelia de Lange syndrome 3 endometrial carcinoma
D	Pharos: Q8WVM7	intellectual disability rheumatoid arthritis non-alcoholic fatty liver disease ovarian cancer primitive neuroectodermal tumor adenoma dental caries Epileptic encephalopathy malignant ependymoma microcephaly oligodendroglioma Pick disease astrocytic tumor diabetes mellitus glioblastoma intellectual disability rheumatoid arthritis non-alcoholic fatty liver disease ovarian cancer primitive neuroectodermal tumor adenoma dental caries Epileptic encephalopathy malignant ependymoma microcephaly oligodendroglioma Pick disease astrocytic tumor diabetes mellitus glioblastoma intellectual disability, autosomal dominant 47 malignant glioma myocardial infarction osteosarcoma pilocytic astrocytoma autism spectrum disorder endogenous depression heart disease large cell medulloblastoma medulloblastoma
E	Pharos: Q6KC79	Cornelia de Lange syndrome chromosome 5p13 duplication syndrome Bone Diseases, Developmental hearing disorder Cornelia de Lange syndrome 1 intellectual disability malignant pancreatic neoplasm osteogenesis imperfecta pancreatic intraductal papillary-mucinous carcinoma plasma cell myeloma congenital heart disease Cornelia de Lange syndrome 2 large cell medulloblastoma malignant mesothelioma medulloblastoma Cornelia de Lange syndrome chromosome 5p13 duplication syndrome Bone Diseases, Developmental hearing disorder Cornelia de Lange syndrome 1 intellectual disability malignant pancreatic neoplasm osteogenesis imperfecta pancreatic intraductal papillary-mucinous carcinoma plasma cell myeloma congenital heart disease Cornelia de Lange syndrome 2 large cell medulloblastoma malignant mesothelioma medulloblastoma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm rheumatoid arthritis Cornelia de Lange syndrome 3 Hodgkins lymphoma lung cancer oligodendroglioma ovarian cancer psoriasis Roberts syndrome exocrine pancreatic carcinoma malignant glioma
H	Pharos: P49711	intellectual disability-feeding difficulties-developmental delay-microcephaly syndrome cancer Precursor T-Cell Lymphoblastic Leukemia-Lymphoma primary cutaneous T-cell non-Hodgkin lymphoma intellectual disability osteosarcoma schizophrenia granulomatous slack skin disease kidney Wilms tumor ovarian cancer microcephaly pancreatic intraductal papillary-mucinous neoplasm