1BX8
HIRUSTASIN FROM HIRUDO MEDICINALIS AT 1.4 ANGSTROMS
X-RAY DIFFRACTION
Crystallization
Crystalization Experiments | ||||
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ID | Method | pH | Temperature | Details |
1 | 5.45 | pH 5.45 |
Crystal Properties | |
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Matthews coefficient | Solvent content |
2 | 40 |
Crystal Data
Unit Cell | |
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Length ( Å ) | Angle ( ˚ ) |
a = 37.713 | α = 90 |
b = 37.713 | β = 90 |
c = 67.812 | γ = 90 |
Symmetry | |
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Space Group | P 43 21 2 |
Diffraction
Diffraction Experiment | ||||||||||||||
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ID # | Crystal ID | Scattering Type | Data Collection Temperature | Detector | Detector Type | Details | Collection Date | Monochromator | Protocol | |||||
1 | 1 | x-ray | 293 | IMAGE PLATE | MARRESEARCH | 1995-06-21 | M |
Radiation Source | |||||
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ID # | Source | Type | Wavelength List | Synchrotron Site | Beamline |
1 | SYNCHROTRON | ESRF BEAMLINE BM1A | ESRF | BM1A |
Data Collection
Overall | |||||||||||||||||||
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ID # | Resolution (High) | Resolution (Low) | Percent Possible (Observed) | R Merge I (Observed) | Net I Over Average Sigma (I) | Redundancy | Number Reflections (All) | Number Reflections (Observed) | Observed Criterion Sigma (F) | Observed Criterion Sigma (I) | B (Isotropic) From Wilson Plot | ||||||||
1 | 1.4 | 7.1 | 98.6 | 0.062 | 50.5 | 10468 |
Highest Resolution Shell | |||||||||||||||||||
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ID # | Resolution (High) | Resolution (Low) | Percent Possible (All) | Percent Possible (Observed) | R Merge I (Observed) | Mean I Over Sigma (Observed) | Redundancy | Number Unique Reflections (All) | |||||||||||
1.4 | 1.45 | 73.4 | 0.376 | 8.5 |
Refinement
Statistics | |||||||||||||||||||
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Diffraction ID | Structure Solution Method | Cross Validation method | Resolution (High) | Resolution (Low) | Number Reflections (All) | Number Reflections (R-Free) | Percent Reflections (Observed) | R-Factor (All) | R-Factor (Observed) | R-Work (Depositor) | R-Work (DCC) | R-Free (Depositor) | R-Free Selection Details | Mean Isotropic B | |||||
X-RAY DIFFRACTION | AB INITIO | FREE R | 1.4 | 7.1 | 10468 | 545 | 98.7 | 0.178 | 0.1768 | 0.54 | 0.2066 | RANDOM (SAME SET AS FOR THE 1.2 A DATA, WHEN AVAILABLE) |
Coordinate Error | ||
---|---|---|
Structure Solution Method | Refinement High Resolution | Refinement Low Resolution |
1 | 323 | 390.5 |
RMS Deviations | |
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Key | Refinement Restraint Deviation |
s_zero_chiral_vol | 0.159 |
s_non_zero_chiral_vol | 0.116 |
s_similar_adp_cmpnt | 0.116 |
s_anti_bump_dis_restr | 0.036 |
s_angle_d | 0.03 |
s_from_restr_planes | 0.028 |
s_bond_d | 0.012 |
s_rigid_bond_adp_cmpnt | 0.003 |
s_similar_dist | |
s_approx_iso_adps |
Non-Hydrogen Atoms Used in Refinement | |
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Non-Hydrogen Atoms | Number |
Protein Atoms | 355 |
Nucleic Acid Atoms | |
Solvent Atoms | 37 |
Heterogen Atoms | 10 |
Software
Software | |
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Software Name | Purpose |
MARXDS | data collection |
MARSCALE | data reduction |
SHELX | model building |
SHELX | refinement |
MARXDS | data reduction |
MARSCALE | data scaling |
SHELX | phasing |