1IJA
Structure of Sortase
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N_edited_NOESY | 2.5 mM Sortase 15N,13C; 50 mM Tris (pH 6.2); 20 mM CaCl2; 100 mM NaCl; 3 mM DTT; 93 % H2O; 7 % D2O | 93% H2O/7% D2O | 100 mM NaCl | 6.2 | ambient | 308 | |
2 | 4D_15N/13C_edited_NOESY | 2.5 mM Sortase 15N,13C; 50 mM Tris (pH 6.2); 20 mM CaCl2; 100 mM NaCl; 3 mM DTT; 93 % H2O; 7 % D2O | 93% H2O/7% D2O | 100 mM NaCl | 6.2 | ambient | 308 | |
3 | 3D_13C_edited_NOESY | 2.5 mM Sortase 15N,13C; 50 mM Tris (pH 6.2); 20 mM CaCl2; 100 mM NaCl; 3 mM DTT; 93 % H2O; 7 % D2O | 93% H2O/7% D2O | 100 mM NaCl | 6.2 | ambient | 308 | |
4 | 4D_13C/13C_edited_NOESY | 2.5 mM Sortase 15N,13C; 50 mM Tris (pH 6.2); 20 mM CaCl2; 100 mM NaCl; 3 mM DTT; 93 % H2O; 7 % D2O | 93% H2O/7% D2O | 100 mM NaCl | 6.2 | ambient | 308 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 500 |
2 | Bruker | DRX | 600 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry and simulated annealing | the structures are based on a total of 2105 experimental restraints, 1852 NOE-derived distance restraints, 195 dihedral angle restraints, 58 Coupling constant restaints | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with acceptable covalent geometry,structures with favorable non-bond energy,structures with the least restraint violations |
Conformers Calculated Total Number | 150 |
Conformers Submitted Total Number | 25 |
Representative Model | 1 (lowest energy) |
Additional NMR Experimental Information | |
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Details | This structure was determined using triple resonance NMR spectroscopy. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 2.6 | Bruker |
2 | processing | NMRPipe | 1.7 | Delaglio, F. |
3 | data analysis | NMRView | 4.1.3 | Johnson, B.A. & Blevins, R.A. |
4 | structure solution | X-PLOR | 3.843 | Brunger, T.A. |
5 | refinement | X-PLOR | 3.843 | Brunger, T.A. |