1KLV
Solution Structure and Backbone Dynamics of GABARAP, GABAA Receptor associated protein
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 1mM GABARAP, 20mM phosphate buffer NA, 50mM NaCl, 0.02mM NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O | 340 | 6.5 | 1 atm | 298 | |
2 | HNHA | 1mM GABARAP, 20mM phosphate buffer NA, 50mM NaCl, 0.02mM NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O | 340 | 6.5 | 1 atm | 298 | |
3 | 2D NOESY | 1mM GABARAP, 20mM phosphate buffer NA, 50mM NaCl, 0.02mM NaN3 | 100% D2O | 340 | 6.5 | 1 atm | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 800 |
2 | Bruker | DMX | 500 |
3 | Bruker | DMX | 500 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry, simulated annealing | This structure are based on a total of 976 restraints, 861 are NOE-derived distance constraints, 59 dihedral angle restraints, 56 distance restraints from hydrogen bonds. | NMRPipe |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 20 |
Additional NMR Experimental Information | |
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Details | This structure was determined using standard 3D heteronuclear techniques. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | Delaglio, F., Grzesiek, S., Vuister, G.W., Zhu, G., Pfeifer, J. and Bax, A. | |
2 | processing | PIPP | Garrett, D.S., Powers, R., Gronenborn, A.M. and Clore, G.M. | |
3 | refinement | X-PLOR | 3.1 | Brunger, A.T. |