1QR5
SOLUTION STRUCTURE OF HISTIDINE CONTAINING PROTEIN (HPR) FROM STAPHYLOCOCCUS CARNOSUS
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | NOESY | 90% H2O/10 % D2O | 7.14 | 298.00 | ||||
2 | DQF-COSY | 90% H2O/10 % D2O | 7.14 | 298.00 | ||||
3 | TOCSY | 90% H2O/10 % D2O | 7.14 | 298.00 | ||||
4 | NOESY-HSQC | 90% H2O/10 % D2O | 7.14 | 298.00 | ||||
5 | TOCSY-HSQC | 90% H2O/10 % D2O | 7.14 | 298.00 | ||||
6 | 15N-HSQC | 90% H2O/10 % D2O | 7.14 | 298.00 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AMX-500 | 500 |
2 | Bruker | DMX-800 | 800 |
NMR Refinement | ||
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Method | Details | Software |
RESTRAINED MD | RESTRAINED SIMULATED ANEALING PROTOCOL. CONSTRAINTS: 1301 NOES, 523 INTRARESIDUAL (I,I), 382 INTERMEDIATE RANGE (I,I+2), 56 INTERMEDIATE RANGE (I,I+3), 31 INTERMEDIATE RANGE (I,I+4), 224 LONG RANGE (I,J; J > I+4), 78 J-COUPLINGS (3JNH-HA). STRUCTURAL STATISTICS FOR THE 30 LOWEST-ENERGY STRUCTURES (REFERENCE 1): ENERGIES: TOTAL, 190.8 +-8.4 KJ/MOL; NOE, 57.6 +- 4.6 KJ/MOL; DIHEDRAL, 35.6 +- 6.1 KJ/MOL; BOND, 8.4 +- 0.4 KJ/MOL; ANGLE, 64.0 +-2.6 KJ/MOL; VDW, 16.7 +- 2.3 KJ/MOL; IMPROPER, 8.6 +- 1.2 KJ/MOL; ELECTRIC, 35.6 +- 6.1 kJ/MOL. RMSDS: AMINO ACID 1-88 (WHOLE PROTEIN), BACKBONE ATOMS 0.093 NM, ALL NON-HYDROGEN ATOMS 0.13 NM. RMSDS: AMINO ACID 8-19 (ACTIVE CENTER), BACKBONE ATOMS 0.091 NM, ALL NON-HYDROGEN ATOMS 0.13 NM. | X-PLOR |
NMR Ensemble Information | |
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Conformer Selection Criteria | LOWEST CONFORMATIONAL ENERGY |
Conformers Calculated Total Number | 2300 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (n/a) |
Additional NMR Experimental Information | |
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Details | THE STRUCTURE WAS DETERMINED USING 15N-LABELED PROTEIN. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | X-PLOR | 3.51 | BRUNGER |
2 | structure solution | X-PLOR |