1YHP
Solution Structure of Ca2+-free DdCAD-1
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 0.8mM DdCAD-1 U-15N, 13C; 10mM PIPES buffer; 1mM EGTA, 1mM DTT, 0.05mM sodium azide, 90% H2O, 10% D2O | 90% H2O/10% D2O | 10mM PIPES, 0.05mM sodium azide | 6.2 | 1 atm | 303 | |
2 | 4D_13C/15N-separated_NOESY | 0.8mM DdCAD-1 U-15N, 13C; 10mM PIPES buffer; 1mM EGTA, 1mM DTT, 0.05mM sodium azide, 90% H2O, 10% D2O | 90% H2O/10% D2O | 10mM PIPES, 0.05mM sodium azide | 6.2 | 1 atm | 303 | |
3 | 4D_13C-separated_NOESY | 0.8mM DdCAD-1 U-15N, 13C; 10mM PIPES buffer; 1mM EGTA, 1mM DTT, 0.05mM sodium azide, 99% D2O | 99.9% D2O | 10mM PIPES, 0.05mM sodium azide | 6.2 | 1 atm | 303 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 500 |
NMR Refinement | ||
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Method | Details | Software |
torsion angle dynamics | the structures are based on a total of 4847 restraints, 4481 are NOE-derived distance constraints, 212 dihedral angle restraints,154 distance restraints from hydrogen bonds | CYANA |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | CYANA | 1.0.5 | Peter Guntert |
2 | processing | NMRPipe | 1 | Frank Delaglio, et al |
3 | data analysis | NMRView | 5.04 | Johnson |
4 | refinement | CYANA | 1.0.5 | Peter Guntert |