1CI5
GLYCAN-FREE MUTANT ADHESION DOMAIN OF HUMAN CD58 (LFA-3)
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | NOESY | 10% D2O | 10 mM NAPO4 | 7.5 | 1 atm | 298 | ||
2 | NOESY-HSQC | 10% D2O | 10 mM NAPO4 | 7.5 | 1 atm | 298 | ||
3 | HNCA | 10% D2O | 10 mM NAPO4 | 7.5 | 1 atm | 298 | ||
4 | CBCA(CO)NH | 10% D2O | 10 mM NAPO4 | 7.5 | 1 atm | 298 | ||
5 | HBHA(CBCACO)NH | 10% D2O | 10 mM NAPO4 | 7.5 | 1 atm | 298 | ||
6 | HCCH-TOCSY | 10% D2O | 10 mM NAPO4 | 7.5 | 1 atm | 298 | ||
7 | HNHA | 10% D2O | 10 mM NAPO4 | 7.5 | 1 atm | 298 | ||
8 | HNHB | 10% D2O | 10 mM NAPO4 | 7.5 | 1 atm | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AMX500 | 500 |
2 | Varian | INOVA500 | 500 |
3 | Varian | INOVA750 | 750 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry | NO NOE VIOLATION GREATER THAN 0.3 A, NO DIHEDRAL ANGLE VIOLATION GREATER THAN 5 DEGREE. AVERAGE BACKBONE ATOM (RESIDUE 3 - 95) RMSD TO MEAN STRUCTURE 0.37 A, AVERAGE HEAVY ATOM (RESIDUE 3 - 95) RMSD TO MEAN STRUCTURE 0.93 A. | X-PLOR |
NMR Ensemble Information | |
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Conformer Selection Criteria | LEAST ENERGY FUNCTION |
Conformers Calculated Total Number | 25 |
Conformers Submitted Total Number | 20 |
Representative Model | 3 (n/a) |
Additional NMR Experimental Information | |
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Details | THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY ON 13C, 15N-LABELED 1DCD58-6M. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | X-PLOR | 3.851 | BRUNGER |
2 | structure solution | XEASY | ||
3 | structure solution | X-PLOR | ||
4 | structure solution | DIANA | ||
5 | structure solution | DYANA |