1CKR
HIGH RESOLUTION SOLUTION STRUCTURE OF THE HEAT SHOCK COGNATE-70 KD SUBSTRATE BINDING DOMAIN OBTAINED BY MULTIDIMENSIONAL NMR TECHNIQUES
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | HNCA | 1.5 MM 15N OR 15N,13C LABELED PROTEIN 5%D20/95%H2O AND 100%D2O | 50 mM SODIUM PHOSPHATE | 7.0 | 1 atm | 298 | ||
2 | HN(CA)HA | 1.5 MM 15N OR 15N,13C LABELED PROTEIN 5%D20/95%H2O AND 100%D2O | 50 mM SODIUM PHOSPHATE | 7.0 | 1 atm | 298 | ||
3 | HN(CO)CA | 1.5 MM 15N OR 15N,13C LABELED PROTEIN 5%D20/95%H2O AND 100%D2O | 50 mM SODIUM PHOSPHATE | 7.0 | 1 atm | 298 | ||
4 | HA(CACO)NH | 1.5 MM 15N OR 15N,13C LABELED PROTEIN 5%D20/95%H2O AND 100%D2O | 50 mM SODIUM PHOSPHATE | 7.0 | 1 atm | 298 | ||
5 | CP H(C)CCH-TOCSY | 1.5 MM 15N OR 15N,13C LABELED PROTEIN 5%D20/95%H2O AND 100%D2O | 50 mM SODIUM PHOSPHATE | 7.0 | 1 atm | 298 | ||
6 | CP (H)CCH-TOCSY | 1.5 MM 15N OR 15N,13C LABELED PROTEIN 5%D20/95%H2O AND 100%D2O | 50 mM SODIUM PHOSPHATE | 7.0 | 1 atm | 298 | ||
7 | CP(H)C(CCACO)NH-TOCSY | 1.5 MM 15N OR 15N,13C LABELED PROTEIN 5%D20/95%H2O AND 100%D2O | 50 mM SODIUM PHOSPHATE | 7.0 | 1 atm | 298 | ||
8 | 15N-RESOLVED NOESY-HSQC | 1.5 MM 15N OR 15N,13C LABELED PROTEIN 5%D20/95%H2O AND 100%D2O | 50 mM SODIUM PHOSPHATE | 7.0 | 1 atm | 298 | ||
9 | 13CRESOLVED NOESY-HMQC | 1.5 MM 15N OR 15N,13C LABELED PROTEIN 5%D20/95%H2O AND 100%D2O | 50 mM SODIUM PHOSPHATE | 7.0 | 1 atm | 298 | ||
10 | 4D 13C | 1.5 MM 15N OR 15N,13C LABELED PROTEIN 5%D20/95%H2O AND 100%D2O | 50 mM SODIUM PHOSPHATE | 7.0 | 1 atm | 298 | ||
11 | 13C RESOLVED HMQC-NOESY3D 13C | 1.5 MM 15N OR 15N,13C LABELED PROTEIN 5%D20/95%H2O AND 100%D2O | 50 mM SODIUM PHOSPHATE | 7.0 | 1 atm | 298 | ||
12 | 13N RESOLVED HMQC-NOESY-HSQC3D 13C | 1.5 MM 15N OR 15N,13C LABELED PROTEIN 5%D20/95%H2O AND 100%D2O | 50 mM SODIUM PHOSPHATE | 7.0 | 1 atm | 298 | ||
13 | 13C RESOLVED HMQC-NOESY-HSQC | 1.5 MM 15N OR 15N,13C LABELED PROTEIN 5%D20/95%H2O AND 100%D2O | 50 mM SODIUM PHOSPHATE | 7.0 | 1 atm | 298 | ||
14 | -HSQC | 1.5 MM 15N OR 15N,13C LABELED PROTEIN 5%D20/95%H2O AND 100%D2O | 50 mM SODIUM PHOSPHATE | 7.0 | 1 atm | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AMX | 500 |
2 | Bruker | AMX | 600 |
3 | Bruker | DMX | 750 |
NMR Refinement | ||
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Method | Details | Software |
DISTANCE GEOMETRY, SIMULATE ANNEALING | STRUCTURE WAS EXTENSIVELY MINIMIZED. THE PROTOCOL CAN BE FOUND IN THE JRNL CITATION ABOVE | Discover |
NMR Ensemble Information | |
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Conformer Selection Criteria | LOWEST TOTAL ENERGY |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 20 |
Additional NMR Experimental Information | |
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Details | ASSIGNMENTS OBTAINED WITH TRIPLE RESONANCE NMR SPECTROSCOPY; STEREO-SPECIFIC ASSIGNMENTS WITH 10% 13C LABELED GLUCOSE; STRUCTURE WITH 2 HIGH RESOLUTION 4-D AND 6 3D HETERONUCLEAR-RESOLVED NOESY EXPERIMENTS. SCALAR COUPLINGS WITH HNHA; DYNAMICS WITH T1 AND T2 (NITROGEN) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | Discover | BIOSYM | |
2 | structure solution | Felix | ||
3 | structure solution | MSI INSIGHT | INSIGHT | |
4 | structure solution | MSI DISCOVER | DISCOVER |