1FNX
SOLUTION STRUCTURE OF THE HUC RBD1-RBD2 COMPLEXED WITH THE AU-RICH ELEMENT
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 20mM phosphate K buffer; 0.8mM RBD1-RBD2 U-15N,13C; 0.8mM ARE; 1mM DTT; 100 units/ml ribonuclease inhibitor | 90% H2O/10% D2O | 20mM | 6.0 | ambient | 298 | |
2 | 3D_13C-separated_NOESY | 20mM phosphate K buffer; 0.8mM RBD1-RBD2 U-15N,13C; 0.8mM ARE; 1mM DTT; 100 units/ml ribonuclease inhibitor | 90% H2O/10% D2O | 20mM | 6.0 | ambient | 298 | |
3 | 3D_13C-separated_NOESY | 20mM phosphate K buffer; 0.8mM RBD1-RBD2; 0.8mM ARE U-15N,13C; 1mM DTT; 100 units/ml ribonuclease inhibitor | 90% H2O/10% D2O | 20mM | 6.0 | ambient | 298 | |
4 | 3D_13C-separated_NOESY | 20mM phosphate K buffer; 0.8mM RBD1-RBD2; 0.8mM ARE U-15N,13C; 1mM DTT; 100 units/ml ribonuclease inhibitor | 100% D2O | 20mM | 6.0 | ambient | 298 | |
5 | 3D_13C-separated_NOESY | 20mM phosphate K buffer; 0.8mM RBD1-RBD2; 0.8mM ARE U-15N,13C-Adenosine; 1mM DTT; 100 units/ml ribonuclease inhibitor | 90% H2O/10% D2O | 20mM | 6.0 | ambient | 298 | |
6 | 3D_13C-separated_NOESY | 20mM phosphate K buffer; 0.8mM RBD1-RBD2; 0.8mM ARE U-15N,13C-Adenosine; 1mM DTT; 100 units/ml ribonuclease inhibitor | 100% D2O | 20mM | 6.0 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DMX | 500 |
2 | Bruker | DRX | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing, torsion angle dynamics | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy. CONFORMER 21 IS THE MINIMIZED AVERAGE STRUCTURE OF CONFORMERS 1-20 |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 21 |
Representative Model | 21 (conformer 21 is the minimized average structure of conformers 1-20) |
Additional NMR Experimental Information | |
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Details | The structure was determined using triple-resonance NMR spectroscopy |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | CNS | 0.9 | Brunger |
2 | refinement | CNS | 0.9 | Brunger et al. |