1G70
COMPLEX OF HIV-1 RRE-IIB RNA WITH RSG-1.2 PEPTIDE
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D homonuclear experiments, 2D, 3D heteronuclear experiments | 10mM Sodium phosphate, 12.5mM Sodium acetate, 25mM Sodium chloride, 0.1mM EDTA | 6.0 | ambient | 298 | |||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing, molecular dynamics | NMRPipe | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with acceptable covalent geometry,structures with the least restraint violations,structures with the lowest energy |
| Conformers Calculated Total Number | 90 |
| Conformers Submitted Total Number | 14 |
| Representative Model | 1 (n/a) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | NMRPipe | 1 | Delaglio, F., et al. |
| 2 | data analysis | NMRView | 2.1.2 | Johnson, B.A., Blevins, R.A. |
| 3 | structure solution | Amber | 4.1 | Kollman, P., et al. |
| 4 | refinement | Amber | 4.1 | Kollman, P., et al. |
