1NZ9
Solution Structure of the N-utilization substance G (NusG) C-terminal (NGC) domain from Thermus thermophilus
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 2mM NusG C-domain, 50mM phosphate buffer, 100mM KCL, 95% H2O, 5% D2O | 95% H2O/5% D2O | 50mM phospahte, 100mM KCl | 5.5 | ambient | 318 | |
2 | HSQC | 2mM 15N NusG C-domain, 50mM phosphate buffer, 100mM KCL | 100% D2O | 50mM phospahte, 100mM KCl | 5.5 | ambient | 318 | |
3 | HMQC-J | 2mM 15N NusG C-domain, 50mM phosphate buffer, 100mM KCL, 95% H2O, 5% D2O | 95% H2O/5% D2O | 50mM phospahte, 100mM KCl | 5.5 | ambient | 318 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DMX | 500 |
2 | Bruker | DMX | 750 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing, molecular dynamics, torsion angle dynamics | 566 UNAMBIGUOUS NOE DISTANCE RESTRAINTS, 52 HYDROGEN BOND RESTRAINTS, 46 HN-N DIPOLAR COUPLINGS, NO RESONANCES WERE ASSIGNED FOR ALA 127 | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy, NONE WITH DISTANCE VIOLATIONS > 0.2 ANGSTROMS, NONE WITH DIHEDRAL ANGLE RESTRAINT VIOLATIONS > 2 DEGREES |
Conformers Calculated Total Number | 90 |
Conformers Submitted Total Number | 31 |
Representative Model | 1 (lowest energy) |
Additional NMR Experimental Information | |
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Details | Model 31 is the minimized average structure |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | XwinNMR | 2.6 | Bruker |
2 | data analysis | ANSIG | 3.3 | Kraulis |
3 | structure solution | CNS | 1.1 | Brunger |
4 | refinement | CNS | 1.1 |