2GGR
Solution structure of the C-terminal SH3 domain of c-CrkII
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | 0.4 mM cSH3 domain U-15N,13C; 10mM phosphate buffer pH7.2; 50mM NaCl; 5mM DTT-d10; 0.1% NaN3; 1mM EDTA; 90% H2O, 10% D2O | 90% H2O/10% D2O | 50mM | 7.2 | ambient | 298 | |
2 | 3D_15N-separated_NOESY | 0.4 mM cSH3 domain U-15N,13C; 10mM phosphate buffer pH7.2; 50mM NaCl; 5mM DTT-d10; 0.1% NaN3; 1mM EDTA; 90% H2O, 10% D2O | 90% H2O/10% D2O | 50mM | 7.2 | ambient | 298 | |
3 | 3D_13C_aromatic_NOESY | 0.4 mM cSH3 domain U-15N,13C; 10mM phosphate buffer pH7.2; 50mM NaCl; 5mM DTT-d10; 0.1% NaN3; 1mM EDTA; 90% H2O, 10% D2O | 90% H2O/10% D2O | 50mM | 7.2 | ambient | 298 | |
4 | HNHA | 0.4 mM cSH3 domain U-15N,13C; 10mM phosphate buffer pH7.2; 50mM NaCl; 5mM DTT-d10; 0.1% NaN3; 1mM EDTA; 90% H2O, 10% D2O | 90% H2O/10% D2O | 50mM | 7.2 | ambient | 298 | |
5 | HNCO_3J | 0.4 mM cSH3 domain U-15N,13C; 10mM phosphate buffer pH7.2; 50mM NaCl; 5mM DTT-d10; 0.1% NaN3; 1mM EDTA; 90% H2O, 10% D2O | 90% H2O/10% D2O | 50mM | 7.2 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 500 |
2 | Bruker | AVANCE | 700 |
3 | Bruker | AVANCE | 800 |
4 | Varian | INOVA | 600 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry simulated annealing | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations,structures with the lowest energy |
Conformers Calculated Total Number | 500 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | CNS | 1.1 | Brunger |
2 | structure solution | ARIA | 2.2 | Nilges |