2HC5
Solution NMR Structure of Protein yvyC from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR482.
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D 15N-, 13Cali-, 13Caro-resolved NOESY | 1.1 mM sr482 protein 10mM Tris buffer, 100mM NaCl, 0.02% NaN3, 95% H2O / 5% D20 | 95% H2O/5% D2O | 100 mM | 6.5 | 1 atm | 298 | |
2 | (4,3)D GFT CABCA(CO)NHN | 1.1 mM sr482 protein 10mM Tris buffer, 100mM NaCl, 0.02% NaN3, 95% H2O / 5% D20 | 95% H2O/5% D2O | 100 mM | 6.5 | 1 atm | 298 | |
3 | (4,3)D GFT HNNCABCA | 1.1 mM sr482 protein 10mM Tris buffer, 100mM NaCl, 0.02% NaN3, 95% H2O / 5% D20 | 95% H2O/5% D2O | 100 mM | 6.5 | 1 atm | 298 | |
4 | (4,3)D GFT HABCAB(CO)NHN | 1.1 mM sr482 protein 10mM Tris buffer, 100mM NaCl, 0.02% NaN3, 95% H2O / 5% D20 | 95% H2O/5% D2O | 100 mM | 6.5 | 1 atm | 298 | |
5 | (4,3)D GFT HCCH-COSY (ali) | 1.1 mM sr482 protein 10mM Tris buffer, 100mM NaCl, 0.02% NaN3, 95% H2O / 5% D20 | 95% H2O/5% D2O | 100 mM | 6.5 | 1 atm | 298 | |
6 | (4,3)D GFT HCCH-COSY (aro) | 1.1 mM sr482 protein 10mM Tris buffer, 100mM NaCl, 0.02% NaN3, 95% H2O / 5% D20 | 95% H2O/5% D2O | 100 mM | 6.5 | 1 atm | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 750 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | Explicit water bath refinement | VNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | VNMR | 6.1C | Varian, Inc. |
2 | data analysis | XEASY | 1.3.13 | Bartels, Ch. |
3 | data analysis | CARA | 1.5.3 | Keller, R. |
4 | processing | PROSA | 6.0 | Guentert, P. |
5 | structure solution | CYANA | 2.1 | Guentert, P. |
6 | refinement | CYANA | 2.1 | Guentert, P. |