2J43

Alpha-glucan recognition by family 41 carbohydrate-binding modules from streptococcal virulence factors


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.3747.63

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 37.621α = 90
b = 71.42β = 89.98
c = 101.013γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray113 MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X8CNSLSX8C

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.637.6296.80.099.25.09683932
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.61.6695.10.483.15.14

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-Work (Depositor)R-Work (DCC)R-Free (Depositor)R-Free (DCC)R-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.62064932343696.80.1810.1790.19480.2160.228RANDOM17.19
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.01-0.030.05-0.04
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg16.189
r_scangle_it4.467
r_scbond_it2.921
r_mcangle_it1.973
r_angle_refined_deg1.707
r_mcbond_it1.117
r_angle_other_deg0.899
r_symmetry_vdw_other0.365
r_nbd_other0.257
r_nbd_refined0.223
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3554
Nucleic Acid Atoms
Solvent Atoms497
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement