2KAD
Magic-Angle-Spinning Solid-State NMR Structure of Influenza A M2 Transmembrane Domain
SOLID-STATE NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 13C-13C DQF_COSY | 4-6 mg/mL Selective U-13C, 15N labeled M2 Transmembrane Peptide, 15-25 mg/mL DLPC, 10 mM sodium phosphate, 0.1 mM sodium azide, 1 mM EDTA, 20-25 mL H2O | Solid-State NMR: Hydrated DLPC gel, approx. 50% H2O by weight. DLPC:M2TMP:Amantadine 15:1:8 | 7.5 | ambient | 243 | ||
2 | 2D 15N-13C HETCOR | 4-6 mg/mL Selective U-13C, 15N labeled M2 Transmembrane Peptide, 15-25 mg/mL DLPC, 10 mM sodium phosphate, 0.1 mM sodium azide, 1 mM EDTA, 20-25 mL H2O | Solid-State NMR: Hydrated DLPC gel, approx. 50% H2O by weight. DLPC:M2TMP:Amantadine 15:1:8 | 7.5 | ambient | 243 | ||
3 | 2D DARR | 4-6 mg/mL Selective U-13C, 15N labeled M2 Transmembrane Peptide, 15-25 mg/mL DLPC, 10 mM sodium phosphate, 0.1 mM sodium azide, 1 mM EDTA, 20-25 mL H2O | Solid-State NMR: Hydrated DLPC gel, approx. 50% H2O by weight. DLPC:M2TMP:Amantadine 15:1:8 | 7.5 | ambient | 243 | ||
4 | 2D INADEQUATE | 4-6 mg/mL Selective U-13C, 15N labeled M2 Transmembrane Peptide, 15-25 mg/mL DLPC, 10 mM sodium phosphate, 0.1 mM sodium azide, 1 mM EDTA, 20-25 mL H2O | Solid-State NMR: Hydrated DLPC gel, approx. 50% H2O by weight. DLPC:M2TMP:Amantadine 15:1:8 | 7.5 | ambient | 243 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
2 | Bruker | DRX | 400 |
NMR Refinement | ||
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Method | Details | Software |
torsion angle dynamics | TALOS | TopSpin |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 1 |
Conformers Submitted Total Number | 1 |
Representative Model | 1 (fewest violations) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | TopSpin | 1.3 | Bruker Biospin |
2 | structure solution | Insight II | 2005 | Accelrys Software Inc. |
3 | refinement | Insight II | 2005 | Accelrys Software Inc. |