2L0I
Solution structure of Rtt103 CTD-interacting domain bound to a Ser2 phosphorylated CTD peptide
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 1 mM [U-98% 13C; U-98% 15N] Rtt103-1, 10 mM [U-99% 2H] TRIS-2, 120 mM sodium chloride-3, 1.5 mM CTD-4 | 90% H2O/10% D2O | 0.120 | 7.4 | ambient | 298 | |
2 | 2D 1H-13C HSQC | 1 mM [U-98% 13C; U-98% 15N] Rtt103-1, 10 mM [U-99% 2H] TRIS-2, 120 mM sodium chloride-3, 1.5 mM CTD-4 | 90% H2O/10% D2O | 0.120 | 7.4 | ambient | 298 | |
3 | 3D 1H-13C NOESY | 1 mM [U-98% 13C; U-98% 15N] Rtt103-1, 10 mM [U-99% 2H] TRIS-2, 120 mM sodium chloride-3, 1.5 mM CTD-4 | 90% H2O/10% D2O | 0.120 | 7.4 | ambient | 298 | |
4 | 3D 1H-15N NOESY | 1 mM [U-98% 13C; U-98% 15N] Rtt103-1, 10 mM [U-99% 2H] TRIS-2, 120 mM sodium chloride-3, 1.5 mM CTD-4 | 90% H2O/10% D2O | 0.120 | 7.4 | ambient | 298 | |
5 | 3D HCCH-TOCSY | 1 mM [U-98% 13C; U-98% 15N] Rtt103-1, 10 mM [U-99% 2H] TRIS-2, 120 mM sodium chloride-3, 1.5 mM CTD-4 | 90% H2O/10% D2O | 0.120 | 7.4 | ambient | 298 | |
6 | 2D 1H-1H NOESY | 1 mM [U-98% 13C; U-98% 15N] Rtt103-1, 10 mM [U-99% 2H] TRIS-2, 120 mM sodium chloride-3, 1.5 mM CTD-4 | 90% H2O/10% D2O | 0.120 | 7.4 | ambient | 298 | |
7 | 2D 1H-1H TOCSY | 1 mM [U-98% 13C; U-98% 15N] Rtt103-1, 10 mM [U-99% 2H] TRIS-2, 120 mM sodium chloride-3, 1.5 mM CTD-4 | 90% H2O/10% D2O | 0.120 | 7.4 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AMX | 500 |
NMR Refinement | ||
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Method | Details | Software |
torsion angle dynamics | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | CNS | 1.2 | Brunger, Adams, Clore, Gros, Nilges and Read |
2 | structure solution | CNS | 1.2 | HADDOCK -Bonvin |
3 | refinement | CNS | 1.2 | HADDOCK -Bonvin |