2MT9
Solution structure of holo_FldB
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 1 mM [U-15N] protein-1, 30 mM sodium phosphate-2, 2 mM FLAVIN MONONUCLEOTIDE-3 | 90% H2O/10% D2O | 7 | ambient | 298 | ||
2 | 3D CBCA(CO)NH | 1 mM [U-13C; U-15N] protein-4, 30 mM sodium phosphate-5, 2 mM FLAVIN MONONUCLEOTIDE-6 | 90% H2O/10% D2O | 7 | ambient | 298 | ||
3 | 3D HNCO | 1 mM [U-13C; U-15N] protein-4, 30 mM sodium phosphate-5, 2 mM FLAVIN MONONUCLEOTIDE-6 | 90% H2O/10% D2O | 7 | ambient | 298 | ||
4 | 3D HNCA | 1 mM [U-13C; U-15N] protein-4, 30 mM sodium phosphate-5, 2 mM FLAVIN MONONUCLEOTIDE-6 | 90% H2O/10% D2O | 7 | ambient | 298 | ||
5 | 3D HNCACB | 1 mM [U-13C; U-15N] protein-4, 30 mM sodium phosphate-5, 2 mM FLAVIN MONONUCLEOTIDE-6 | 90% H2O/10% D2O | 7 | ambient | 298 | ||
6 | 3D HBHA(CO)NH | 1 mM [U-13C; U-15N] protein-4, 30 mM sodium phosphate-5, 2 mM FLAVIN MONONUCLEOTIDE-6 | 90% H2O/10% D2O | 7 | ambient | 298 | ||
7 | 3D 1H-15N NOESY | 1 mM [U-15N] protein-1, 30 mM sodium phosphate-2, 2 mM FLAVIN MONONUCLEOTIDE-3 | 90% H2O/10% D2O | 7 | ambient | 298 | ||
8 | 3D 1H-13C NOESY | 1 mM [U-13C; U-15N] protein-4, 30 mM sodium phosphate-5, 2 mM FLAVIN MONONUCLEOTIDE-6 | 90% H2O/10% D2O | 7 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
2 | Bruker | AVANCE | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | CYANA |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (minimized average structure) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
2 | refinement | Amber | Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman |