2MZY
1H, 13C, and 15N Chemical Shift Assignments and structure of Probable Fe(2+)-trafficking protein from Burkholderia pseudomallei 1710b.
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 1 mM [U-95% 13C; U-95% 15N] Probable Fe(2+)-trafficking protein | 90% H2O/10% D2O | 6.5 | ambient | 298 | ||
2 | 2D 1H-13C HSQC | 1 mM [U-95% 13C; U-95% 15N] Probable Fe(2+)-trafficking protein | 90% H2O/10% D2O | 6.5 | ambient | 298 | ||
3 | 3D CBCA(CO)NH | 1 mM [U-95% 13C; U-95% 15N] Probable Fe(2+)-trafficking protein | 90% H2O/10% D2O | 6.5 | ambient | 298 | ||
4 | 3D HNCACB | 1 mM [U-95% 13C; U-95% 15N] Probable Fe(2+)-trafficking protein | 90% H2O/10% D2O | 6.5 | ambient | 298 | ||
5 | 3D HCCH-TOCSY | 1 mM [U-95% 13C; U-95% 15N] Probable Fe(2+)-trafficking protein | 90% H2O/10% D2O | 6.5 | ambient | 298 | ||
6 | 3D HNCO | 1 mM [U-95% 13C; U-95% 15N] Probable Fe(2+)-trafficking protein | 90% H2O/10% D2O | 6.5 | ambient | 298 | ||
7 | 3D H(CCO)NH | 1 mM [U-95% 13C; U-95% 15N] Probable Fe(2+)-trafficking protein | 90% H2O/10% D2O | 6.5 | ambient | 298 | ||
8 | 3D HBHA(CO)NH | 1 mM [U-95% 13C; U-95% 15N] Probable Fe(2+)-trafficking protein | 90% H2O/10% D2O | 6.5 | ambient | 298 | ||
9 | 3D 1H-13C NOESY aliphatic | 1 mM [U-95% 13C; U-95% 15N] Probable Fe(2+)-trafficking protein | 90% H2O/10% D2O | 6.5 | ambient | 298 | ||
10 | 3D 1H-15N NOESY | 1 mM [U-95% 13C; U-95% 15N] Probable Fe(2+)-trafficking protein | 90% H2O/10% D2O | 6.5 | ambient | 298 | ||
11 | 3D 1H-13C NOESY aromatic | 1 mM [U-95% 13C; U-95% 15N] Probable Fe(2+)-trafficking protein | 90% H2O/10% D2O | 6.5 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AMX | 500 |
2 | Bruker | AVANCE | 800 |
NMR Refinement | ||
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Method | Details | Software |
torsion angle dynamics | TopSpin |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | TopSpin | Bruker Biospin | |
2 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
3 | chemical shift assignment | CCPNMR | CCPN | |
4 | data analysis | CCPNMR | CCPN | |
5 | peak picking | CCPNMR | CCPN | |
6 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
7 | refinement | CYANA | Guntert, Mumenthaler and Wuthrich | |
8 | geometry optimization | TALOS | Cornilescu, Delaglio and Bax |