2RMJ
Solution structure of RIG-I C-terminal domain
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 0.5mM [U-100% 13C; U-100% 15N] RIG-I | 90% H2O/10% D2O | 0.25 | 7 | 288 | ||
2 | 2D 1H-13C HSQC | 0.5mM [U-100% 13C; U-100% 15N] RIG-I | 90% H2O/10% D2O | 0.25 | 7 | 288 | ||
3 | 3D CBCA(CO)NH | 0.5mM [U-100% 13C; U-100% 15N] RIG-I | 90% H2O/10% D2O | 0.25 | 7 | 288 | ||
4 | 3D C(CO)NH | 0.5mM [U-100% 13C; U-100% 15N] RIG-I | 90% H2O/10% D2O | 0.25 | 7 | 288 | ||
5 | 3D HNCO | 0.5mM [U-100% 13C; U-100% 15N] RIG-I | 90% H2O/10% D2O | 0.25 | 7 | 288 | ||
6 | 3D HNCA | 0.5mM [U-100% 13C; U-100% 15N] RIG-I | 90% H2O/10% D2O | 0.25 | 7 | 288 | ||
7 | 3D HNCACB | 0.5mM [U-100% 13C; U-100% 15N] RIG-I | 90% H2O/10% D2O | 0.25 | 7 | 288 | ||
8 | 3D HBHA(CO)NH | 0.5mM [U-100% 13C; U-100% 15N] RIG-I | 90% H2O/10% D2O | 0.25 | 7 | 288 | ||
9 | 3D HN(CO)CA | 0.5mM [U-100% 13C; U-100% 15N] RIG-I | 90% H2O/10% D2O | 0.25 | 7 | 288 | ||
10 | 3D H(CCO)NH | 0.5mM [U-100% 13C; U-100% 15N] RIG-I | 90% H2O/10% D2O | 0.25 | 7 | 288 | ||
11 | 3D HCCH-TOCSY | 0.5mM [U-100% 13C; U-100% 15N] RIG-I | 90% H2O/10% D2O | 0.25 | 7 | 288 | ||
12 | 3D 1H-15N NOESY | 0.5mM [U-100% 13C; U-100% 15N] RIG-I | 90% H2O/10% D2O | 0.25 | 7 | 288 | ||
13 | 3D 1H-13C NOESY | 0.5mM [U-100% 13C; U-100% 15N] RIG-I | 90% H2O/10% D2O | 0.25 | 7 | 288 | ||
14 | CCH-TOCSY | 0.5mM [U-100% 13C; U-100% 15N] RIG-I | 90% H2O/10% D2O | 0.25 | 7 | 288 | ||
15 | (HB)CB(CGCD)HD | 0.5mM [U-100% 13C; U-100% 15N] RIG-I | 90% H2O/10% D2O | 0.25 | 7 | 288 | ||
16 | HNCAHA | 0.5mM [U-100% 13C; U-100% 15N] RIG-I | 90% H2O/10% D2O | 0.25 | 7 | 288 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 800 |
2 | Varian | INOVA | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics, distance geometry, simulated annealing | CYANA |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
2 | refinement | CYANA | Guntert, Mumenthaler and Wuthrich |