2K4F
Mouse CD3epsilon Cytoplasmic Tail
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 0.6 mM [U-100% 13C; U-100% 15N] Mouse CD3e, 100 mM POPG, 125 mM [U-100% 2H] DHPC | 90% H2O/10% D2O | 20 | 6.7 | ambient | 300 | |
2 | 2D 1H-13C HSQC | 0.6 mM [U-100% 13C; U-100% 15N] Mouse CD3e, 100 mM POPG, 125 mM [U-100% 2H] DHPC | 90% H2O/10% D2O | 20 | 6.7 | ambient | 300 | |
3 | 3D HNCA | 0.6 mM [U-100% 13C; U-100% 15N; 90% 2H] Mouse CD3e, 100 mM POPG, 125 mM [U-100% 2H] DHPC | 90% H2O/10% D2O | 20 | 6.7 | ambient | 300 | |
4 | 3D HNCACB | 0.6 mM [U-100% 13C; U-100% 15N; 90% 2H] Mouse CD3e, 100 mM POPG, 125 mM [U-100% 2H] DHPC | 90% H2O/10% D2O | 20 | 6.7 | ambient | 300 | |
5 | 3D 1H-15N NOESY | 0.6 mM [U-100% 13C; U-100% 15N] Mouse CD3e, 100 mM POPG, 125 mM [U-100% 2H] DHPC | 90% H2O/10% D2O | 20 | 6.7 | ambient | 300 | |
6 | 3D 1H-15N TOCSY | 0.6 mM [U-100% 13C; U-100% 15N] Mouse CD3e, 100 mM POPG, 125 mM [U-100% 2H] DHPC | 90% H2O/10% D2O | 20 | 6.7 | ambient | 300 | |
7 | 3D 1H-13C NOESY (Methyl) | 0.6 mM [U-100% 13C; U-100% 15N] Mouse CD3e, 100 mM POPG, 125 mM [U-100% 2H] DHPC | 90% H2O/10% D2O | 20 | 6.7 | ambient | 300 | |
8 | 3D 1H-13C NOESY aromatic | 0.6 mM [U-100% 13C; U-100% 15N] Mouse CD3e, 100 mM POPG, 125 mM [U-100% 2H] DHPC | 90% H2O/10% D2O | 20 | 6.7 | ambient | 300 | |
9 | 3D 1H-15N NOESY (NOEs to lipid) | 0.6 mM [U-100% 13C; U-100% 15N; 90% 2H] Mouse CD3e, 100 mM POPG, 125 mM [U-100% 2H] DHPC | 90% H2O/10% D2O | 20 | 6.7 | ambient | 300 | |
10 | 3D 1H-13C NOESY (double 13C-filtered) | 0.6 mM [U-100% 13C; U-100% 15N] Mouse CD3e, 100 mM POPG, 125 mM [U-100% 2H] DHPC | 90% H2O/10% D2O | 20 | 6.7 | ambient | 300 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing, molecular dynamics | X-PLOR NIH |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (fewest violations) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | X-PLOR NIH | 2.19 | Schwieters, C.D. et al. |
2 | refinement | X-PLOR NIH | 2.19 | Schwieters, C.D. et al. |
3 | processing | NMRPipe | 3.0 | Delaglio, F. et al. |
4 | peak picking | NMRPipe | 3.0 | Delaglio, F. et al. |
5 | data analysis | XEASY | 1.2 | Bartels, C. et al. |
6 | chemical shift assignment | XEASY | 1.2 | Bartels, C. et al. |
7 | peak picking | XEASY | 1.2 | Bartels, C. et al. |