2K9X
Solution structure of Urm1 from Trypanosoma brucei
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 0.8mM [U-13C; U-15N] TbUrm1, 1.5mM DTT, 50mM sodium phosphate, 100mM sodium chloride | 90% H2O/10% D2O | 6.5 | ambient | 298 | ||
2 | 3D CBCA(CO)NH | 0.8mM [U-13C; U-15N] TbUrm1, 1.5mM DTT, 50mM sodium phosphate, 100mM sodium chloride | 90% H2O/10% D2O | 6.5 | ambient | 298 | ||
3 | 3D C(CO)NH | 0.8mM [U-13C; U-15N] TbUrm1, 1.5mM DTT, 50mM sodium phosphate, 100mM sodium chloride | 90% H2O/10% D2O | 6.5 | ambient | 298 | ||
4 | 3D HNCO | 0.8mM [U-13C; U-15N] TbUrm1, 1.5mM DTT, 50mM sodium phosphate, 100mM sodium chloride | 90% H2O/10% D2O | 6.5 | ambient | 298 | ||
5 | 3D HNCA | 0.8mM [U-13C; U-15N] TbUrm1, 1.5mM DTT, 50mM sodium phosphate, 100mM sodium chloride | 90% H2O/10% D2O | 6.5 | ambient | 298 | ||
6 | 3D HNCACB | 0.8mM [U-13C; U-15N] TbUrm1, 1.5mM DTT, 50mM sodium phosphate, 100mM sodium chloride | 90% H2O/10% D2O | 6.5 | ambient | 298 | ||
7 | 3D HBHA(CO)NH | 0.8mM [U-13C; U-15N] TbUrm1, 1.5mM DTT, 50mM sodium phosphate, 100mM sodium chloride | 90% H2O/10% D2O | 6.5 | ambient | 298 | ||
8 | 3D HCCH-TOCSY | 0.8mM [U-13C; U-15N] TbUrm1, 1.5mM DTT, 50mM sodium phosphate, 100mM sodium chloride | 100% D2O | 6.5 | ambient | 298 | ||
9 | 3D HCCH-COSY | 0.8mM [U-13C; U-15N] TbUrm1, 1.5mM DTT, 50mM sodium phosphate, 100mM sodium chloride | 100% D2O | 6.5 | ambient | 298 | ||
10 | 3D 1H-13C NOESY | 0.8mM [U-13C; U-15N] TbUrm1, 1.5mM DTT, 50mM sodium phosphate, 100mM sodium chloride | 100% D2O | 6.5 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DMX | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | CNS | Brunger, Adams, Clore, Gros, Nilges, Read | |
2 | refinement | CNS | Brunger, Adams, Clore, Gros, Nilges, Read |