2KB8
The dynamic alpha-helix structure of micelle-bound human amylin.
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D 1H-15N NOESY | 0.5 mM [U-99% 15N] amylin, 100 mM [U-2H] SDS, 60 mM acetic acid | 90% H2O/10% D2O | 60 | 4.6 | ambient | 310 | |
2 | 3D HNCA | 0.5 mM [U-99% 15N] amylin, 100 mM [U-2H] SDS, 60 mM acetic acid | 90% H2O/10% D2O | 60 | 4.6 | ambient | 310 | |
3 | 3D HNHB | 0.5 mM [U-99% 15N] amylin, 100 mM [U-2H] SDS, 60 mM acetic acid | 90% H2O/10% D2O | 60 | 4.6 | ambient | 310 | |
4 | 2D 1H-1H NOESY | 0.5 mM [U-99% 15N] amylin, 100 mM [U-2H] SDS, 60 mM acetic acid | 90% H2O/10% D2O | 60 | 4.6 | ambient | 310 | |
5 | 3D TROSY | 0.5 mM [U-99% 15N] amylin, 100 mM [U-2H] SDS, 60 mM acetic acid | 90% H2O/10% D2O | 60 | 4.6 | ambient | 310 | |
6 | 3D TOCSY | 0.5 mM [U-99% 15N] amylin, 100 mM [U-2H] SDS, 60 mM acetic acid | 90% H2O/10% D2O | 60 | 4.6 | ambient | 310 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
NMR Refinement | ||
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Method | Details | Software |
DGSA-distance geometry simulated annealing | X-PLOR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 30 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | X-PLOR | 3.851 | Brunger |
2 | refinement | X-PLOR | 3.851 | Brunger |