X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1EVAPORATION29116% PEG 3350, 16mM BICINE pH 9.0, 20mM HEPES pH 7.5, 4.4% w/v Polyacrylic Acid 5100 Sodium salt, 10mM Praseodymium (III) acetate hydrate, 100 mM NDSB-256
Crystal Properties
Matthews coefficientSolvent content
3.3162.85

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 106.397α = 90
b = 172.979β = 90
c = 186.845γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315r2014-09-06MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSSRF BEAMLINE BL17U0.9792SSRFBL17U

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
13.35099.912.619.8249674
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
13.33.4

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-Work (Depositor)R-Work (DCC)R-Free (Depositor)R-Free (DCC)R-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT3.349.0749674266999.460.249690.246230.260.315850.32RANDOM89.173
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.01-0.020.03
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.93
r_dihedral_angle_3_deg22.179
r_dihedral_angle_4_deg17.013
r_long_range_B_refined13.773
r_long_range_B_other13.772
r_dihedral_angle_1_deg10.662
r_mcangle_other9.032
r_mcangle_it9.03
r_scangle_other8.264
r_mcbond_it5.502
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms15638
Nucleic Acid Atoms
Solvent Atoms24
Heterogen Atoms14

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data processing
HKL-2000data scaling
PHENIXphasing