7EDK
NMR solution structure of Bt14.12, a novel A-family conotoxin from Conus betulinus
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H COSY | 20 mM sodium phosphate | 90% H2O/10% D2O | 20 mM | 5.5 | 1 bar | 298 | Bruker AVANCE III 850 |
2 | 2D 1H-1H TOCSY | 20 mM sodium phosphate | 90% H2O/10% D2O | 20 mM | 5.5 | 1 bar | 298 | Bruker AVANCE III 850 |
3 | 2D 1H-1H NOESY | 20 mM sodium phosphate | 90% H2O/10% D2O | 20 mM | 5.5 | 1 bar | 298 | Bruker AVANCE III 850 |
4 | 2D 1H-15N HSQC | 20 mM sodium phosphate | 90% H2O/10% D2O | 20 mM | 5.5 | 1 bar | 298 | Bruker AVANCE III 850 |
5 | 2D 1H-13C HSQC | 20 mM sodium phosphate | 90% H2O/10% D2O | 20 mM | 5.5 | 1 bar | 298 | Bruker AVANCE III 850 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE III | 850 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | CNS |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 300 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
5 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
4 | peak picking | NMRFAM-SPARKY | Lee, Tonelli, Markley, et al. | |
3 | chemical shift assignment | NMRFAM-SPARKY | Lee, Tonelli, Markley, et al. | |
2 | structure calculation | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
1 | refinement | CNS | Brunger, Adams, Clore, Gros, Nilges and Read |