1M8V
U5P: URIDINE-5'-MONOPHOSPHATE
U5P is a Ligand Of Interest in 1M8V designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1M8V_U5P_J_419 | 50% | 80% | 0.127 | 0.884 | 0.26 | 0.58 | - | 1 | 10 | 0 | 95% | 0.88 |
1M8V_U5P_A_410 | 34% | 82% | 0.144 | 0.836 | 0.27 | 0.52 | - | - | 5 | 0 | 95% | 0.91 |
1M8V_U5P_D_476 | 34% | 88% | 0.139 | 0.829 | 0.23 | 0.43 | - | - | 3 | 0 | 95% | 0.9 |
1M8V_U5P_B_411 | 33% | 85% | 0.132 | 0.819 | 0.28 | 0.45 | - | - | 11 | 0 | 95% | 0.94 |
1M8V_U5P_E_414 | 32% | 83% | 0.138 | 0.818 | 0.33 | 0.45 | - | - | 3 | 0 | 95% | 0.92 |
1M8V_U5P_M_423 | 32% | 87% | 0.155 | 0.835 | 0.33 | 0.37 | - | - | 2 | 0 | 95% | 0.96 |
1M8V_U5P_H_417 | 29% | 79% | 0.145 | 0.812 | 0.29 | 0.56 | - | - | 4 | 0 | 95% | 0.95 |
1M8V_U5P_G_416 | 29% | 81% | 0.138 | 0.8 | 0.28 | 0.54 | - | 1 | 2 | 0 | 95% | 0.97 |
1M8V_U5P_C_412 | 28% | 88% | 0.134 | 0.793 | 0.3 | 0.36 | - | - | 8 | 0 | 95% | 0.93 |
1M8V_U5P_K_476 | 26% | 52% | 0.143 | 0.793 | 0.45 | 1.39 | - | 3 | 9 | 0 | 95% | 0.96 |
1M8V_U5P_I_418 | 24% | 82% | 0.149 | 0.784 | 0.28 | 0.52 | - | - | 4 | 0 | 95% | 0.86 |
1M8V_U5P_M_422 | 21% | 79% | 0.15 | 0.764 | 0.29 | 0.56 | - | - | 7 | 0 | 95% | 0.95 |
1M8V_U5P_L_421 | 18% | 81% | 0.152 | 0.745 | 0.32 | 0.5 | - | - | 5 | 0 | 95% | 0.95 |
1M8V_U5P_F_415 | 16% | 81% | 0.18 | 0.756 | 0.3 | 0.51 | - | - | 3 | 0 | 95% | 0.91 |
3G1X_U5P_A_229 | 100% | 48% | 0.021 | 0.996 | 1.08 | 0.92 | 1 | 2 | 0 | 0 | 100% | 1 |
4MML_U5P_A_103 | 100% | 83% | 0.026 | 0.994 | 0.29 | 0.49 | - | - | 1 | 0 | 95% | 1 |
3W07_U5P_A_301 | 100% | 55% | 0.037 | 0.997 | 0.79 | 0.96 | - | - | 3 | 0 | 100% | 1 |
6YWU_U5P_A_501 | 100% | 40% | 0.036 | 0.994 | 1.2 | 1.13 | 2 | 1 | 0 | 0 | 100% | 1 |
2E6Y_U5P_B_302 | 100% | 49% | 0.04 | 0.993 | 1.11 | 0.85 | 1 | 1 | 1 | 0 | 100% | 1 |