3PYE


CDM: 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL

CDM is a Ligand Of Interest in 3PYE designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3PYE_CDM_A_307Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3PYE_CDM_A_307Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3PYE_CDM_A_307 5% 7% 0.322 0.7322.76 2.07 6 1020100%1
2V2Z_CDM_A_1269 90% 59% 0.09 0.9720.73 0.84 1 100100%1
3Q80_CDM_B_501 90% 9% 0.097 0.9792.99 1.5 8 600100%1
1INI_CDM_A_1001 85% 18% 0.096 0.9622.1 1.47 9 600100%1
8QC7_CDM_A_301 78% 10% 0.09 0.9323.52 0.94 14 200100%1
1OJ4_CDM_A_1284 67% 18% 0.109 0.9182.41 1.13 7 200100%1