NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5GV3 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5GV3_NAG_B_210Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5GV3_NAG_B_210Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5GV3_NAG_B_210 64% 88% 0.1 0.8980.18 0.48 - -00100%1
5GV3_NAG_A_211 60% 84% 0.099 0.8830.31 0.44 - -00100%1
5GV3_NAG_A_214 59% 81% 0.105 0.8840.39 0.43 - -00100%1
5GV3_NAG_A_210 38% 53% 0.135 0.8370.56 1.24 - 120100%1
5GV3_NAG_B_211 36% 80% 0.14 0.830.46 0.38 - -00100%1
5GV3_NAG_B_207 21% 73% 0.163 0.770.47 0.57 - -00100%1
5GV3_NAG_B_208 14% 76% 0.135 0.6830.3 0.63 - 110100%1
5GV3_NAG_B_209 8% 68% 0.162 0.6310.46 0.76 - 110100%1
5GV3_NAG_A_212 7% 77% 0.173 0.6190.26 0.65 - -00100%1
5GV3_NAG_A_213 3% 73% 0.173 0.492 0.6 0.45 1 -00100%1
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%1
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%1
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%1
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%1
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%1