NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5WY8 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5WY8_NAG_A_1103Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5WY8_NAG_A_1103Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5WY8_NAG_A_1103Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5WY8_NAG_A_1103 17% 74% 0.161 0.7330.38 0.63 - 100100%1
5WY8_NAG_B_403 15% 57% 0.157 0.7170.74 0.93 1 110100%1
5Y32_NAG_B_410 40% 58% 0.139 0.850.87 0.75 2 -20100%1
5XWU_NAG_C_602 30% 30% 0.115 0.7731.57 1.21 2 100100%1
4RCA_NAG_A_401 23% 84% 0.207 0.8270.32 0.43 - -10100%1
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%1
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%1
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%1
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%1
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%1