NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 8HQ2 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8HQ2_NAG_B_804Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8HQ2_NAG_B_804Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8HQ2_NAG_B_804Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
8HQ2_NAG_B_804 46% 81% 0.169 0.9060.17 0.63 - -00100%1
8HQ2_NAG_A_804 33% 88% 0.195 0.8750.22 0.44 - -10100%1
8HQ2_NAG_D_602 25% 89% 0.207 0.840.22 0.41 - -00100%1
8HQ2_NAG_A_805 12% 85% 0.209 0.7380.23 0.5 - -00100%1
8HQ2_NAG_B_805 3% 88% 0.323 0.6480.23 0.43 - -00100%1
8HQ2_NAG_E_602 2% 89% 0.423 0.670.22 0.42 - -00100%1
8HQ2_NAG_E_604 0% 89% 0.702 0.6240.21 0.42 - -00100%1
8HQ2_NAG_D_603 0% 89% 0.964 0.6620.21 0.42 - -00100%1
8HQ2_NAG_B_806 0% 88% 0.603 0.27 0.23 0.43 - -100100%1
8HQ2_NAG_A_806 0% 89% 0.927 0.024 0.22 0.42 - -00100%1
8HQ2_NAG_D_604 0% 88% 1.394 0.293 0.24 0.43 - -10100%1
8HQ2_NAG_E_603 0% 89% 1.049 0.302 0.21 0.42 - -00100%1
5Y31_NAG_A_804 88% 73% 0.045 0.9180.3 0.74 - 100100%1
3G5C_NAG_B_2 48% 66% 0.17 0.9150.52 0.8 - 100100%1
8Y6B_NAG_B_802 48% 84% 0.155 0.8960.25 0.5 - -00100%1
5Y2Z_NAG_H_602 31% 77% 0.19 0.8570.39 0.52 - -00100%1
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%1
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%1
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%1
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%1
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%1