8Y6B


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 8Y6B designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8Y6B_NAG_B_802Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8Y6B_NAG_B_802Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8Y6B_NAG_B_802Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
8Y6B_NAG_B_802 48% 84% 0.155 0.8960.25 0.5 - -00100%1
8Y6B_NAG_E_602 23% 53% 0.268 0.8940.51 1.29 - 230100%1
8Y6B_NAG_F_603 22% 86% 0.246 0.8660.25 0.47 - -00100%1
8Y6B_NAG_D_603 18% 89% 0.224 0.810.21 0.43 - -00100%1
8Y6B_NAG_C_801 17% 71% 0.306 0.8840.44 0.67 - 100100%1
8Y6B_NAG_E_603 15% 79% 0.269 0.8330.36 0.5 - -40100%1
8Y6B_NAG_F_601 14% 62% 0.205 0.7580.68 0.78 1 120100%1
8Y6B_NAG_D_601 12% 89% 0.273 0.8060.23 0.41 - -70100%1
8Y6B_NAG_B_803 12% 78% 0.304 0.8360.45 0.45 - -100100%1
8Y6B_NAG_F_602 11% 80% 0.372 0.8980.38 0.45 - -00100%1
8Y6B_NAG_B_801 11% 54% 0.316 0.8350.47 1.3 - 120100%1
8Y6B_NAG_C_802 7% 91% 0.267 0.7180.2 0.38 - -00100%1
8Y6B_NAG_C_803 3% 89% 0.457 0.8150.22 0.4 - -00100%1
8Y6B_NAG_A_802 2% 47% 0.29 0.5780.78 1.27 1 230100%1
8Y6B_NAG_D_602 1% 91% 0.443 0.5750.19 0.39 - -00100%1
8Y6B_NAG_E_601 0% 56% 0.625 0.555 0.43 1.26 - 220100%1
8Y6B_NAG_A_803 0% 45% 0.672 0.487 0.81 1.29 1 220100%1
8Y6B_NAG_A_801 0% 89% 0.587 0.225 0.21 0.41 - -00100%1
5Y31_NAG_A_804 88% 73% 0.045 0.9180.3 0.74 - 100100%1
3G5C_NAG_B_2 48% 66% 0.17 0.9150.52 0.8 - 100100%1
8HQ2_NAG_B_804 46% 81% 0.169 0.9060.17 0.63 - -00100%1
5Y2Z_NAG_H_602 31% 77% 0.19 0.8570.39 0.52 - -00100%1
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%1
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%1
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%1
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%1
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%1