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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Amin, S."

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This query matches 8 Structures.

Refinements

Structure Determination Methodology

experimental (8)

Experimental Method

SOLUTION NMR (8)

Polymer Entity Type

DNA (8)

Release Date

	2000 - 2004 (4)
	2005 - 2009 (1)
	2010 - 2014 (3)

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1 to 8 of 8 Structures

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1CR3	Download File View File

SOLUTION CONFORMATION OF THE (+)TRANS-ANTI-BENZO[G]CHRYSENE-DA ADDUCT OPPOSITE DT IN A DNA DUPLEX

Suri, A.K., Mao, B., Amin, S., Geacintov, N.E., Patel, D.J.

(1999) J Mol Biol 292: 289-307

Released	2000-02-18
Method	SOLUTION NMR
Macromolecule	DNA (5'-D(CPTPCPTPCPAPCPTPTPCPC)-3') (nucleic acid) DNA (5'-D(GPGPAPAPGPTPGPAPGPAPG)-3') (nucleic acid)
Unique Ligands	BC

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1FJ5	Download File View File

TAMOXIFEN-DNA ADDUCT

Shimotakahara, S., Gorin, A., Kolbanovskiy, A., Kettani, A., Hingerty, B.E., Amin, S., Broyde, S., Geacintov, N., Patel, D.J.

(2000) J Mol Biol 302: 377-393

Released	2000-09-11
Method	SOLUTION NMR
Macromolecule	DNA (5'-D(CPCPAPTPCPGPCPTPAPCPC)-3') (nucleic acid) DNA (5'-D(GPGPTPAPGPCPGPAPTPGPG)-3') (nucleic acid)
Unique Ligands	TAX

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1HWV	Download File View File

MOLECULAR TOPOLOGY OF POLYCYCLIC AROMATIC CARCINOGENS DETERMINES DNA ADDUCT CONFORMATION: A LINK TO TUMORIGENIC ACTIVITY

Patel, D.J., Lin, C.H., Geacintov, N.E., Broyde, S., Huang, X., Kolbanovskii, A., Hingerty, B.E., Amin, S.

(2001) J Mol Biol 306: 1059-1080

Released	2001-03-21
Method	SOLUTION NMR
Macromolecule	5'-D(CPCPAPTPCPGPCPTPAPCPC)-3' (nucleic acid) 5'-D(GPGPTPAPGPCPGPAPTPGPG)-3' (nucleic acid)
Unique Ligands	BPI

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1HX4	Download File View File

MOLECULAR TOPOLOGY OF POLYCYCLIC AROMATIC CARCINOGENS DETERMINES DNA ADDUCT CONFORMATION: A LINK TO TUMORIGENIC ACTIVITY

Patel, D.J., Lin, C.H., Geacintov, N.E., Broyde, S., Huang, X., Kolbanovskii, A., Hingerty, B.E., Amin, S.

(2001) J Mol Biol 306: 1059-1080

Released	2001-03-21
Method	SOLUTION NMR
Macromolecule	5'-D(CPCPAPTPCPGPCPTPAPCPC)-3' (nucleic acid) 5'-D(GPGPTPAPGPCPGPAPTPGPG)-3' (nucleic acid)
Unique Ligands	BPJ

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1Y9H	Download File View File

Methylation of cytosine at C5 in a CpG sequence context causes a conformational switch of a benzo[a]pyrene diol epoxide-N2-guanine adduct in DNA from a minor groove alignment to intercalation with base displacement

Zhang, N., Lin, C., Huang, X., Kolbanovskiy, A., Hingerty, B.E., Amin, S., Broyde, S., Geacintov, N.E., Patel, D.J.

(2005) J Mol Biol 346: 951-965

Released	2005-03-22
Method	SOLUTION NMR
Macromolecule	5'-D(CPCPAPTP(5CM)P(BPG)PCPTPAPCPC)-3' (nucleic acid) 5'-D(GPGPTPAPGPCPGPAPTPGPG)-3' (nucleic acid)
Unique Ligands	BAP

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2LZK	Download File View File

NMR solution structure of an N2-guanine DNA adduct derived from the potent tumorigen dibenzo[a,l]pyrene: Intercalation from the minor groove with ruptured Watson-Crick base pairing

Tang, Y., Liu, Z., Ding, S., Lin, C.H., Cai, Y., Rodriguez, F.A., Sayer, J.M., Jerina, D.M., Amin, S., Broyde, S., Geacintov, N.E.

(2012) Biochemistry 51: 9751-9762

Released	2012-11-21
Method	SOLUTION NMR
Macromolecule	DNA (5'-D(CPCPAPTPCPGPCPTPAPCPC)-3') (nucleic acid) DNA (5'-D(GPGPTPAPGPCPGPAPTPGPG)-3') (nucleic acid)
Unique Ligands	14L

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2MIV	Download File View File

NMR studies of N2-guanine adducts derived from the tumorigen dibenzo[a,l]pyrene in DNA: Impact of adduct stereochemistry, size, and local DNA structure on solution conformations

Rodriguez, F.A., Liu, Z., Lin, C.H., Ding, S., Cai, Y., Kolbanovskiy, A., Kolbanovskiy, M., Amin, S., Broyde, S., Geacintov, N.E.

(2014) Biochemistry 53: 1827-1841

Released	2014-04-02
Method	SOLUTION NMR
Macromolecule	DNA_(5'-D(CPCPAPTPCPGPCPTPAPCPC)-3') (nucleic acid) DNA_(5'-D(GPGPTPAPGPGPAPTPGP*G)-3') (nucleic acid)
Unique Ligands	2QL

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2MIW	Download File View File

Nuclear magnetic resonance studies of N2-guanine adducts derived from the tumorigen dibenzo[a,l]pyrene in DNA: Impact of adduct stereochemistry, size, and local DNA structure on solution conformations

Rodriguez, F.A., Liu, Z., Lin, C.H., Ding, S., Cai, Y., Kolbanovskiy, A., Kolbanovskiy, M., Amin, S., Broyde, S., Geacintov, N.E.

(2014) Biochemistry 53: 1827-1841

Released	2014-04-02
Method	SOLUTION NMR
Macromolecule	DNA_(5'-D(CPCPAPTPCPGPCPTPAPCPC)-3') (nucleic acid) DNA_(5'-D(GPGPTPAPGPCPGPAPTPGPG)-3') (nucleic acid)
Unique Ligands	2QL

1 to 8 of 8 Structures

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