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232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Chase, J."

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Search Summary

This query matches 13 Structures.

Refinements

Structure Determination Methodology

experimental (13)

Scientific Name of Source Organism

	Homo sapiens (10)
	Mycobacterium tuberculosis (2)
	Bos taurus (1)
	Lama glama (1)
	Meleagris gallopavo (1)

Taxonomy

	Eukaryota (11)
	Bacteria (2)

Experimental Method

	X-RAY DIFFRACTION (12)
	ELECTRON MICROSCOPY (1)

Polymer Entity Type

	Protein (13)
	DNA (7)

Refinement Resolution (Å)

	1.5 - 2.0 (3)
	2.0 - 2.5 (3)
	2.5 - 3.0 (6)
	3.5 - 4.0 (1)

Release Date

	2005 - 2009 (2)
	2010 - 2014 (6)
	2015 - 2019 (1)
	2020 - 2024 (4)

Enzyme Classification Name

	Hydrolases (4)
	Isomerases (2)

Membrane Protein Annotation

	MemProtMD (1)
	OPM (1)
	PDBTM (1)
	mpstruc (1)

Symmetry Type

	Cyclic (8)
	Asymmetric (5)

SCOP Classification

	All beta proteins (3)
	Alpha and beta proteins (a+b) (2)
	All alpha proteins (3)
	Artifacts (1)
	Membrane and cell surface proteins and peptides (1)

AllSelected

1 to 13 of 13 Structures

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2FP1	Download File View File

Secreted Chorismate Mutase from Mycobacterium tuberculosis

Okvist, M., Dey, R., Sasso, S., Grahn, E., Kast, P., Krengel, U.

(2006) J Mol Biology 357: 1483-1499

Released	2006-03-28
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Chorismate mutase (protein)
Unique Ligands	PB

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2FP2	Download File View File

Secreted Chorismate Mutase from Mycobacterium tuberculosis

Okvist, M., Dey, R., Sasso, S., Grahn, E., Kast, P., Krengel, U.

(2006) J Mol Biology 357: 1483-1499

Released	2006-03-28
Method	X-RAY DIFFRACTION 1.64 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Chorismate mutase (protein)
Unique Ligands	TSA

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3KMD	Download File View File

Crystal structure of the p53 core domain bound to a full consensus site as a self-assembled tetramer

Chen, Y., Dey, R., Chen, L.

(2010) Structure 18: 246-256

Released	2010-02-23
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Homo sapiens
Macromolecule	Cellular tumor antigen p53 (protein) 5'-D(GPGPGPCPAPTPGPCPCPTPAPGPGPCPAPTPGPCP*C)-3' (nucleic acid)
Unique Ligands	ZN

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3KOV	Download File View File

Structure of MEF2A bound to DNA reveals a completely folded MADS-box/MEF2 domain that recognizes DNA and recruits transcription co-factors

Wu, Y., Dey, R., Han, A., Jayathilaka, N., Philips, M., Ye, J., Chen, L.

(2010) J Mol Biology 397: 520-533

Released	2010-02-16
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	Myocyte-specific enhancer factor 2A (protein) DNA (5'-D(APAPCPTPAPTPTPTPAPTPAPAPG)-3') (nucleic acid) DNA (5'-D(TPCPTPTPAPTPAPAPAPTPAPGPT)-3') (nucleic acid)

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3MU6	Download File View File

Inhibiting the Binding of Class IIa Histone Deacetylases to Myocyte Enhancer Factor-2 by Small Molecules

Jayathilaka, N., Han, A., Gaffney, K., Dey, R., He, J., Ye, J., Gao, T., Petasis, N.A., Chen, L.

(2012) Nucleic Acids Res 40: 5378-5388

Released	2011-11-02
Method	X-RAY DIFFRACTION 2.434 Å
Organisms	Homo sapiens
Macromolecule	Myocyte-specific enhancer factor 2A (protein) DNA (5'-D(APAPAPGPCPTPAPTPTPAPTPTPAPGPCPTPT)-3') (nucleic acid) DNA (5'-D(TPAPAPGPCPTPAPAPTPAPAPTPAPGPCPTPT)-3') (nucleic acid)
Unique Ligands	BXL

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4HC7	Download File View File

Crystal structure of the full DNA binding domain of GATA3-complex 2

Chen, Y., Bates, D.L., Dey, R., Chen, L.

(2012) Cell Rep 2: 1197-1206

Released	2012-12-05
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Homo sapiens
Macromolecule	Trans-acting T-cell-specific transcription factor GATA-3 (protein) DNA (5'-D(APAPGPGPTPTPAPTPCPTPCPTPGPAPTPTPTPAPGPG)-3') (nucleic acid) DNA (5'-D(TPTPCPCPTPAPAPAPTPCPAPGPAPGPAPTPAPAPCPC)-3') (nucleic acid)
Unique Ligands	ZN

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4HC9	Download File View File

DNA binding by GATA transcription factor-complex 3

Chen, Y., Bates, D.L., Dey, R., Chen, L.

(2012) Cell Rep 2: 1197-1206

Released	2012-12-05
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Trans-acting T-cell-specific transcription factor GATA-3 (protein) DNA (5'-D(APAPGPGPTPTPAPTPCPTPCPTPGPAPTPTPTPAPGPG)-3') (nucleic acid) DNA (5'-D(TPTPCPCPTPAPAPAPTPCPAPGPAPGPAPTPAPAPCPC)-3') (nucleic acid)
Unique Ligands	ZN

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4HCA	Download File View File

DNA binding by GATA transcription factor-complex 1

Chen, Y., Bates, D.L., Dey, R., Chen, L.

(2012) Cell Rep 2: 1197-1206

Released	2012-12-05
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	Trans-acting T-cell-specific transcription factor GATA-3 (protein) DNA (5'-D(APAPTPGPTPCPCPAPTPCPTPGPAPTPAPAPGPAPCPG)-3') (nucleic acid) DNA (5'-D(TPTPCPGPTPCPTPTPAPTPCPAPGPAPTPGPGPAPCPA)-3') (nucleic acid)
Unique Ligands	ZN

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6B0T	Download File View File

Structural Insights into the Induced-fit Inhibition of Fascin by a Small Molecule

Dey, R., Huang, X.Y.

(2018) J Mol Biology 430: 1324-1335

Released	2018-04-18
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	Fascin (protein)
Unique Ligands	C7V

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7JJO	Download File View File

Structural Basis of the Activation of Heterotrimeric Gs-protein by Isoproterenol-bound Beta1-Adrenergic Receptor

Su, M., Zhu, L., Zhang, Y., Paknejad, N., Dey, R., Huang, J., Lee, M.Y., Williams, D., Jordan, K.D., Eng, E.T., Ernst, O.P., Meyerson, J.R., Hite, R.K., Walz, T., Liu, W., Huang, X.Y.

(2020) Mol Cell 80: 59

Released	2020-09-02
Method	ELECTRON MICROSCOPY 2.6 Å
Organisms	Bos taurus Lama glama Meleagris gallopavo
Macromolecule	Beta1-Adrenergic Receptor (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Guanine nucleotide-binding protein G(s) subunit alpha isoforms short (protein) Nanobody 35 (protein)
Unique Ligands	5FW

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7XUZ	Download File View File

Crystal structure of a HDAC4-MEF2A-DNA ternary complex

Dai, S.Y., Guo, L., Dey, R., Guo, M., Bates, D., Cayford, J., Chen, X.J., Wei, X.D., Chen, L., Chen, Y.H.

(2024) Nucleic Acids Res 52: 2711-2723

Released	2023-11-29
Method	X-RAY DIFFRACTION 3.591 Å
Organisms	Homo sapiens
Macromolecule	Histone deacetylase 4 (protein) myocyte-specific enhancer factor 2A isoform X4 (protein) DNA (5'-D(TPCPTPTPAPTPAPAPAPTPAPGPT)-3') (nucleic acid) DNA (5'-D(PAPCPTPAPTPTPTPAPTPAPA)-3') (nucleic acid)

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8U5M	Download File View File

Structure of Sts-1 HP domain with rebamipide

Azia, F., Dey, R., French, J.B.

(2024) J Med Chem 67: 1949-1960

Released	2024-02-07
Method	X-RAY DIFFRACTION 2.46 Å
Organisms	Homo sapiens
Macromolecule	Ubiquitin-associated and SH3 domain-containing protein B (protein)
Unique Ligands	VJX

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8U7E	Download File View File

Structure of Sts-1 HP domain with rebamipide derivative

Aziz, F., Dey, R., French, J.B.

(2024) J Med Chem 67: 1949-1960

Released	2024-02-07
Method	X-RAY DIFFRACTION 2.63 Å
Organisms	Homo sapiens
Macromolecule	Ubiquitin-associated and SH3 domain-containing protein B (protein)
Unique Ligands	VXE

1 to 13 of 13 Structures

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