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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Ho, P.S."

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Search Summary

This query matches 43 Structures.

Refinements

Structure Determination Methodology

experimental (43)

Scientific Name of Source Organism

	Archaeoglobus fulgidus (7)
	Saccharomyces cerevisiae (6)
	Tequatrovirus T4 (5)
	Bos taurus (4)
	Punavirus P1 (4)
	Tequintavirus T5 (4)
	Zymomonas mobilis (4)
	synthetic construct (3)
	Pyrococcus abyssi (2)
	Archaeoglobus fulgidus DSM 4304 (1)

More...

Taxonomy

	Duplodnaviria (13)
	Eukaryota (13)
	Archaea (11)
	Bacteria (5)
	other sequences (3)

Experimental Method

X-RAY DIFFRACTION (43)

Polymer Entity Type

	Protein (42)
	DNA (13)
	RNA (2)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (10)
	2.0 - 2.5 (10)
	2.5 - 3.0 (15)
	3.0 - 3.5 (7)

Release Date

	1990 - 1994 (5)
	1995 - 1999 (9)
	2000 - 2004 (16)
	2005 - 2009 (13)

Enzyme Classification Name

	Hydrolases (20)
	Ligases (4)
	Transferases (4)

Symmetry Type

	Asymmetric (17)
	Cyclic (28)
	Dihedral (2)

SCOP Classification

	All beta proteins (7)
	All alpha proteins (20)
	Alpha and beta proteins (a+b) (13)
	Alpha and beta proteins (a/b) (12)
	Artifacts (4)

AllSelected

1 to 25 of 43 Structures

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1AK0	Download File View File

P1 NUCLEASE IN COMPLEX WITH A SUBSTRATE ANALOG

Romier, C., Suck, D.

(1998) Proteins 32: 414-424

Released	1997-12-03
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Penicillium citrinum
Macromolecule	P1 NUCLEASE (protein)
Unique Ligands	ADS, NAG, THS, ZN
Unique branched monosaccharides	NAG

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1ATN	Download File View File

Atomic structure of the actin:DNASE I complex

Kabsch, W., Mannherz, H.G., Suck, D., Pai, E., Holmes, K.C.

(1990) Nature 347: 37-44

Released	1992-07-15
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Bos taurus Oryctolagus cuniculus
Macromolecule	ACTIN (protein) DEOXYRIBONUCLEASE I (protein)
Unique Ligands	ATP, CA
Unique branched monosaccharides	BMA, NAG

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1DNK	Download File View File

THE X-RAY STRUCTURE OF THE DNASE I-D(GGTATACC)2 COMPLEX AT 2.3 ANGSTROMS RESOLUTION

Weston, S.A., Lahm, A., Suck, D.

(1992) J Mol Biol 226: 1237-1256

Released	1994-01-31
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Bos taurus
Macromolecule	PROTEIN (DEOXYRIBONUCLEASE I (DNASE I) (E.C.3.1.21.1)) (protein) DNA (5'-D(GPGPTPAPTPAPC)-3') (nucleic acid) DNA (5'-D(GPGPTPAPTPAPCP*C)-3') (nucleic acid)
Unique branched monosaccharides	NAG

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1E7D	Download File View File

Endonuclease VII (ENDOVII) Ffrom Phage T4

Raaijmakers, H.C.A., Vix, O., Toro, I., Suck, D.

(2001) J Mol Biol 308: 311

Released	2001-05-04
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Tequatrovirus T4
Macromolecule	RECOMBINATION ENDONUCLEASE VII (protein)
Unique Ligands	CA, CL, ZN

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1E7L	Download File View File

Endonuclease VII (EndoVII) N62D mutant from phage T4

Raaijmakers, H.C.A., Vix, O., Toro, I., Suck, D.

(2001) J Mol Biol 308: 311

Released	2001-05-04
Method	X-RAY DIFFRACTION 1.32 Å
Organisms	Tequatrovirus T4
Macromolecule	RECOMBINATION ENDONUCLEASE VII (protein)
Unique Ligands	SO4, ZN

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1EN7	Download File View File

ENDONUCLEASE VII (ENDOVII) FROM PHAGE T4

Raaijmakers, H., Vix, O., Toro, I., Suck, D.

(1999) EMBO J 18: 1447-1458

Released	2000-02-07
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Tequatrovirus T4
Macromolecule	RECOMBINATION ENDONUCLEASE VII (protein)
Unique Ligands	CA, ZN

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1EXN	Download File View File

T5 5'-EXONUCLEASE

Ceska, T.A., Sayers, J.R., Stier, G., Suck, D.

(1996) Nature 382: 90-93

Released	1997-07-07
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Tequintavirus T5
Macromolecule	5'-EXONUCLEASE (protein)

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1H64	Download File View File

CRYSTAL STRUCTURE OF THE SM-RELATED PROTEIN OF P. ABYSSI: THE BIOLOGICAL UNIT IS A HEPTAMER

Mayer, C., Weeks, S., Suck, D.

(2003) J Biol Chem 278: 1239

Released	2002-12-19
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Pyrococcus abyssi
Macromolecule	SNRNP SM-LIKE PROTEIN (protein)

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1HK9	Download File View File

Crystal structure of the Hfq protein from Escherichia coli

Sauter, C., Basquin, J., Suck, D.

(2003) Nucleic Acids Res 31: 4091

Released	2003-07-24
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Escherichia coli
Macromolecule	PROTEIN HFQ (protein)

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1HLO	Download File View File

THE CRYSTAL STRUCTURE OF AN INTACT HUMAN MAX-DNA COMPLEX: NEW INSIGHTS INTO MECHANISMS OF TRANSCRIPTIONAL CONTROL

Brownlie, P., Ceska, T.A., Lamers, M., Romier, C., Theo, H., Suck, D.

(1997) Structure 5: 509-520

Released	1997-10-27
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (TRANSCRIPTION FACTOR MAX) (protein) DNA (5'-D(APCPCPAPCPGPTPGPGPTPG)-3') (nucleic acid) DNA (5'-D(CPAPCPCPAPCPGPTPGPGPT)-3') (nucleic acid)

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1I4K	Download File View File

CRYSTAL STRUCTURE OF AN SM-LIKE PROTEIN (AF-SM1) FROM ARCHAEOGLOBUS FULGIDUS AT 2.5A RESOLUTION

Toro, I., Thore, S., Mayer, C., Basquin, J., Seraphin, B., Suck, D.

(2001) EMBO J 20: 2293-2303

Released	2001-08-22
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Archaeoglobus fulgidus
Macromolecule	PUTATIVE SNRNP SM-LIKE PROTEIN (protein)
Unique Ligands	CIT

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1I5L	Download File View File

CRYSTAL STRUCTURE OF AN SM-LIKE PROTEIN (AF-SM1) FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH SHORT POLY-U RNA

Toro, I., Thore, S., Mayer, C., Basquin, J., Seraphin, B., Suck, D.

(2001) EMBO J 20: 2293-2303

Released	2001-08-28
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Archaeoglobus fulgidus
Macromolecule	PUTATIVE SNRNP SM-LIKE PROTEIN AF-SM1 (protein) 5'-R(UPUP*U)-3' (nucleic acid)
Unique Ligands	URI

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1LFB	Download File View File

THE X-RAY STRUCTURE OF AN ATYPICAL HOMEODOMAIN PRESENT IN THE RAT LIVER TRANSCRIPTION FACTOR LFB1(SLASH)HNF1 AND IMPLICATIONS FOR DNA BINDING

Ceska, T.A., Lamers, M., Monaci, P., Nicosia, A., Cortese, R., Suck, D.

(1993) EMBO J 12: 1805-1810

Released	1993-10-31
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Rattus norvegicus
Macromolecule	LIVER TRANSCRIPTION FACTOR (LFB1) (protein)

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1LJO	Download File View File

CRYSTAL STRUCTURE OF AN SM-LIKE PROTEIN (AF-SM2) FROM ARCHAEOGLOBUS FULGIDUS AT 1.95A RESOLUTION

Toro, I., Basquin, J., Teo-Dreher, H., Suck, D.

(2002) J Mol Biol 320: 129-142

Released	2002-07-03
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Archaeoglobus fulgidus
Macromolecule	Archaeal Sm-like protein AF-Sm2 (protein)
Unique Ligands	ACY, CD

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1M8V	Download File View File

Structure of Pyrococcus abyssii Sm Protein in Complex with a Uridine Heptamer

Thore, S., Mayer, C., Sauter, C., Weeks, S., Suck, D.

(2003) J Biol Chem 278: 1239-1247

Released	2003-02-11
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Pyrococcus abyssi
Macromolecule	PUTATIVE SNRNP SM-LIKE PROTEIN (protein) 5'-R(PUPUPUPUPUPUP*U)-3' (nucleic acid)
Unique Ligands	CA, U5P

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1NZB	Download File View File

Crystal structure of wild type Cre recombinase-loxP synapse

Ennifar, E., Meyer, J.E.W., Buchholz, F., Stewart, A.F., Suck, D.

(2003) Nucleic Acids Res 31: 5449-5460

Released	2003-09-16
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Punavirus P1
Macromolecule	Cre recombinase (protein) loxP DNA (nucleic acid)
Unique Ligands	IOD, MG

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1OUQ	Download File View File

Crystal structure of wild-type Cre recombinase-loxP synapse

Ennifar, E., Meyer, J.E.W., Buchholz, F., Stewart, A.F., Suck, D.

(2003) Nucleic Acids Res 31: 5449-5460

Released	2003-09-16
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Punavirus P1
Macromolecule	Cre recombinase (protein) loxP DNA (nucleic acid)
Unique Ligands	IOD, MG

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1PUD	Download File View File

TRNA-GUANINE TRANSGLYCOSYLASE

Romier, C., Reuter, K., Suck, D., Ficner, R.

(1996) EMBO J 15: 2850-2857

Released	1997-07-07
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Zymomonas mobilis
Macromolecule	TRNA-GUANINE TRANSGLYCOSYLASE (protein)
Unique Ligands	ZN

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1Q3U	Download File View File

Crystal structure of a wild-type Cre recombinase-loxP synapse: pre-cleavage complex

Ennifar, E., Meyer, J.E.W., Buchholz, F., Stewart, A.F., Suck, D.

(2003) Nucleic Acids Res 31: 5449-5460

Released	2003-09-16
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Punavirus P1
Macromolecule	Cre recombinase (protein) loxP DNA (nucleic acid)
Unique Ligands	IOD, MG

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1Q3V	Download File View File

Crystal structure of a wild-type Cre recombinase-loxP synapse: phosphotyrosine covalent intermediate

Ennifar, E., Meyer, J.E.W., Buchholz, F., Stewart, A.F., Suck, D.

(2003) Nucleic Acids Res 31: 5449-5460

Released	2003-09-16
Method	X-RAY DIFFRACTION 2.91 Å
Organisms	Punavirus P1
Macromolecule	Cre recombinase (protein) loxP DNA (nucleic acid)
Unique Ligands	IOD, MG

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1QPH	Download File View File

CRYSTAL STRUCTURE OF THE A-DNA DODECAMER GACCACGTGGTC

Raaijmakers, H., Suck, D., Mayer, C.

To be published

Released	1999-05-27
Method	X-RAY DIFFRACTION 2.5 Å
Macromolecule	5'-D(PGPAPCPCPAPCPGPTPGPGPTPCP)-3' (nucleic acid)

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1TH7	Download File View File

Crystal Structure of an Archaeal Sm Protein from Sulfolobus solfataricus

Kilic, T., Suck, D.

(2005) Proteins 61: 689-693

Released	2005-06-07
Method	X-RAY DIFFRACTION 1.68 Å
Organisms	Saccharolobus solfataricus
Macromolecule	Small nuclear riboprotein protein (protein)

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1UOC	Download File View File

X-ray structure of the RNase domain of the yeast Pop2 protein

Thore, S., Mauxion, F., Seraphin, B., Suck, D.

(2003) EMBO Rep 4: 1150

Released	2003-11-20
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	POP2 (protein)
Unique Ligands	CA, XE

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1UT5	Download File View File

Divalent metal ions (manganese) bound to T5 5'-exonuclease

Ceska, T.A., Sayers, J.R., Suck, D.

(2004) Nat Struct Mol Biol 11: 450

Released	2004-02-05
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Tequintavirus T5
Macromolecule	EXODEOXYRIBONUCLEASE (protein)
Unique Ligands	MN

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1UT8	Download File View File

Divalent metal ions (zinc) bound to T5 5'-exonuclease

Ceska, T.A., Sayers, J.R., Suck, D.

(2004) Nat Struct Mol Biol 11: 450

Released	2004-02-05
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Tequintavirus T5
Macromolecule	EXODEOXYRIBONUCLEASE (protein)
Unique Ligands	ZN

1 to 25 of 43 Structures

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